RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 TRAV9-2A0A087WT02 112 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 A0A087WWL8 130 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 TRAV1-1A0A0B4J248 108 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 GAGE12JA6NER3 117 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 TEX46H3BTG2 121 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 IFNA1P01562 189 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 CXCL1P09341 107 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 BCL2P10415 239 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 SULT1A2P50226 295 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 ERVFC1-1P60608 527 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 GAGE1Q13065 139 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 GAGE4Q13068 117 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 GAGE5Q13069 117 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 BAGE2Q86Y30 109 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 C10orf126Q8N4M7 172 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 C14orf178Q8N769 122 aaPredicted RBP4.4□□□□□ -1.71
IRF9-208ENST00000560311 MLST8Q9BVC4 326 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 TPPP3Q9BW30 176 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 JPT2Q9H910 190 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
IRF9-208ENST00000560311 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 F8WDY8 70 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 K7EP13 123 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 MEF2BQ02080 365 aaPredicted RBP4.39□□□□□ -1.71
IRF9-208ENST00000560311 LINC01556Q5JQF7 62 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 LELP1Q5T871 98 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 NFE4Q86UQ8 179 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 OR10AG1Q8NH19 301 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 ATP6V0E2Q8NHE4 81 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 SFRP2Q96HF1 295 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
IRF9-208ENST00000560311 SNAI2O43623 268 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 PDE6DO43924 150 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 GNG4P50150 75 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 ZNF56Q15929 161 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 TOR2AQ5JU69 321 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 NTN5Q8WTR8 489 aaPredicted RBP4.38□□□□□ -1.71
IRF9-208ENST00000560311 Q9UF83 564 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 MUC4Q99102 2169 aa4.38□□□□□ -1.71
IRF9-208ENST00000560311 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 TRBV20OR9-2A0A075B6H5 130 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 A0A087WTM6 91 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 MUC21A0A0G2JKD1 596 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 MUC21A0A140T8X8 626 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 NDUFS6O75380 124 aaKnown RBP4.37□□□□□ -1.71
IRF9-208ENST00000560311 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 OR5AL1P0C617 328 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 FUSP35637 526 aaKnown RBP eCLIP4.37□□□□□ -1.71
IRF9-208ENST00000560311 LAGE3Q14657 143 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 SPANXN1Q5VSR9 72 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 ALKAL2Q6UX46 152 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 SMIM12Q96EX1 92 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 AP1S3Q96PC3 154 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 VCX2Q9H322 139 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 Q9HAA7 133 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 VAX2Q9UIW0 290 aa4.37□□□□□ -1.71
IRF9-208ENST00000560311 TRBV10-1A0A0K0K1A3 114 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 RAB19A4D1S5 217 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 IBA57-AS1B1ANH7 110 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 PSCAO43653 123 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 P01737 135 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 GZMBP10144 247 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 NKX2-5P52952 324 aaPredicted RBP4.36□□□□□ -1.71
IRF9-208ENST00000560311 UBE2D3P61077 147 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 UBE2D2P62837 147 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 OR2D3Q8NGH3 330 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 MED9Q9NWA0 146 aa4.36□□□□□ -1.71
IRF9-208ENST00000560311 A0A087WWC5 75 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 A0A1B0GVG6 124 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 RBFOX3A6NFN3 312 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 IGLC6P0CF74 106 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 RAB4AP20338 218 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
IRF9-208ENST00000560311 RPS20P60866 119 aaKnown RBP4.35□□□□□ -1.71
IRF9-208ENST00000560311 RAB4BP61018 213 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
IRF9-208ENST00000560311 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 FER1L6-AS1Q8NA97 138 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 NEXN-AS1Q8NBZ9 246 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 OR10G8Q8NGN5 311 aa4.35□□□□□ -1.71
IRF9-208ENST00000560311 RPL36ALQ969Q0 106 aaKnown RBP4.35□□□□□ -1.71
IRF9-208ENST00000560311 DAZAP1Q96EP5 407 aaKnown RBP4.35□□□□□ -1.71
IRF9-208ENST00000560311 TRBV7-3A0A075B6L6 115 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 K7EN84 100 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 MGPP08493 103 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 SMIM17P0DL12 118 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 CTRLP40313 264 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 CACNG7P62955 275 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
IRF9-208ENST00000560311 MAPKAPK5-AS1Q8N8E1 139 aa4.34□□□□□ -1.71
IRF9-208ENST00000560311 RPP21Q9H633 154 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms