RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 FXYD4P59646 89 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 CCL8P80075 99 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 RBM3P98179 157 aaKnown RBP1.4□□□□□ -2.19
SPG11-218ENST00000559754 XAF1Q6GPH4 301 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 CYP2G1PQ6ZSU1 146 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 TTC9CQ8N5M4 171 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 C10orf82Q8WW14 230 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 KIAA0100Q14667 2235 aaKnown RBP1.4□□□□□ -2.19
SPG11-218ENST00000559754 ZNF609O15014 1411 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 ARFGEF1Q9Y6D6 1849 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 UBE2L5PA0A1B0GUS4 154 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 TMEM262E9PQX1 116 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 J3QKU1 62 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 SSSCA1O60232 199 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 UBE2L3P68036 154 aaKnown RBP1.39□□□□□ -2.19
SPG11-218ENST00000559754 ZNF818PQ6ZRF7 136 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 SPTSSBQ8NFR3 76 aa1.39□□□□□ -2.19
SPG11-218ENST00000559754 ABCC10Q5T3U5 1492 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 SPAG17Q6Q759 2223 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 TRAV13-2A0A0B4J235 113 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 LOC101927531A0A1B0GV80 90 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 UBE2D1P51668 147 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 PKIAP61925 76 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 DCDP81605 110 aaKnown RBP1.38□□□□□ -2.19
SPG11-218ENST00000559754 FXYD3Q14802 87 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 COMMD6Q7Z4G1 85 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 TOPAZ1Q8N9V7 1692 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 MED12Q93074 2177 aa1.38□□□□□ -2.19
SPG11-218ENST00000559754 ESPL1Q14674 2120 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 TANC1Q9C0D5 1861 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 LRRC37A3O60309 1634 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 ARHGAP5Q13017 1502 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 TET3O43151 1660 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
SPG11-218ENST00000559754 H3BQ15 152 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 SIX6O95475 246 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 C5orf56Q8N8D9 126 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 PPP1R1CQ8WVI7 109 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 DPH3P1Q9H4G8 78 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 SDK1Q7Z5N4 2213 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 C10orf71Q711Q0 1435 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 CHD1O14646 1710 aa1.37□□□□□ -2.19
SPG11-218ENST00000559754 LOC285556D6RIA3 1793 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 HCG22E2RYF7 251 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 S100A10P60903 97 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 NCMAPQ5T1S8 102 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 Q6ZQY7 126 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 CASKIN1Q8WXD9 1431 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 CYP4F30PQ9H0H9 118 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 SIPA1L3O60292 1781 aaPredicted RBP1.36□□□□□ -2.19
SPG11-218ENST00000559754 PXDNQ92626 1479 aa1.36□□□□□ -2.19
SPG11-218ENST00000559754 MAP2P11137 1827 aaKnown RBP1.36□□□□□ -2.19
SPG11-218ENST00000559754 CACNA1BQ00975 2339 aa1.35□□□□□ -2.19
SPG11-218ENST00000559754 RB1CC1Q8TDY2 1594 aa1.35□□□□□ -2.19
SPG11-218ENST00000559754 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
SPG11-218ENST00000559754 SPTBP11277 2137 aa1.35□□□□□ -2.19
SPG11-218ENST00000559754 CCL3L1P16619 93 aa1.35□□□□□ -2.19
SPG11-218ENST00000559754 LINC00575Q6W349 94 aa1.35□□□□□ -2.19
SPG11-218ENST00000559754 TROQ12816 1431 aaPredicted RBP1.34□□□□□ -2.19
SPG11-218ENST00000559754 PPIP5K1Q6PFW1 1433 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 PCLOQ9Y6V0 5065 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 PSME4Q14997 1843 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 CAV3P56539 151 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 SSBP1Q04837 148 aaKnown RBP1.34□□□□□ -2.19
SPG11-218ENST00000559754 ZNF56Q15929 161 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 COL5A1-AS1Q5SY13 56 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 C20orf197Q8N268 126 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 BET1LQ9NYM9 111 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 TEX14Q8IWB6 1497 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 FYCO1Q9BQS8 1478 aa1.34□□□□□ -2.19
SPG11-218ENST00000559754 MED13Q9UHV7 2174 aa1.34□□□□□ -2.2
SPG11-218ENST00000559754 SCAPERQ9BY12 1400 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 GAPVD1Q14C86 1478 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 PRDM2Q13029 1718 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 RBAKDNA6NC62 111 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 NCR3O14931 201 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 MPC2O95563 127 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 KLKP1Q107X0 134 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 FAM74A4Q5TZK3 123 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 MYOZ3Q8TDC0 251 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 COX7B2Q8TF08 81 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 LINC00208Q96KT6 92 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 CCL19Q99731 98 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 LINC00312Q9Y6C7 94 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 ABCA4P78363 2273 aa1.33□□□□□ -2.2
SPG11-218ENST00000559754 CLPSL1A2RUU4 121 aa1.32□□□□□ -2.2
SPG11-218ENST00000559754 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
SPG11-218ENST00000559754 SNHG12Q9BXW3 62 aa1.32□□□□□ -2.2
SPG11-218ENST00000559754 AP4S1Q9Y587 144 aa1.32□□□□□ -2.2
SPG11-218ENST00000559754 KIAA1551Q9HCM1 1747 aa1.32□□□□□ -2.2
SPG11-218ENST00000559754 TRBV30A0A0K0K1B3 111 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 FXYD1O00168 92 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 LINC00032P0C843 101 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 EFNA4P52798 201 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 GNG2P59768 71 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 DPY30Q9C005 99 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 NCOA6Q14686 2063 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms