RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 ZDBF2Q9HCK1 2354 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 TCHHQ07283 1943 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 C20orf202A1L168 122 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 ATP6V1G2-DDX39BF2Z307 99 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 PPP1R1CQ8WVI7 109 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 DSCR8Q96T75 97 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 C12orf57Q99622 126 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 TCEAL7Q9BRU2 100 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 NRKQ7Z2Y5 1582 aa1.04□□□□□ -2.24
CTDSPL2-207ENST00000559738 LOC285556D6RIA3 1793 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 MAP2P11137 1827 aaKnown RBP1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 CCL3L1P16619 93 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 UBE2D1P51668 147 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 KLKP1Q107X0 134 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 PPP3R2Q96LZ3 170 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 BET1LQ9NYM9 111 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 PZPP20742 1482 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 IFT140Q96RY7 1462 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 KDM6BO15054 1643 aa1.03□□□□□ -2.24
CTDSPL2-207ENST00000559738 TRAV13-2A0A0B4J235 113 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 OOSP1A8MZH6 123 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 LY6G6CO95867 125 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 TNFP01375 233 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 ELOF1P60002 83 aaKnown RBP1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 SSBP1Q04837 148 aaKnown RBP1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 FAM74A4Q5TZK3 123 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 GTF2H5Q6ZYL4 71 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 C4orf33Q8N1A6 199 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 SVBPQ8N300 66 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 Q8N6K4 173 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 COX7B2Q8TF08 81 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 CASKIN1Q8WXD9 1431 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 TMEM14BQ9NUH8 114 aa1.02□□□□□ -2.25
CTDSPL2-207ENST00000559738 TNS1Q9HBL0 1735 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 CPSF1Q10570 1443 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 RBAKDNA6NC62 111 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 HCG22E2RYF7 251 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 SPINT3P49223 89 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 CCL8P80075 99 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 C8orf59Q8N0T1 100 aaPredicted RBP1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 PLAC4Q8WY50 150 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 ABCA1O95477 2261 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 MED13LQ71F56 2210 aa1.01□□□□□ -2.25
CTDSPL2-207ENST00000559738 C10orf99Q6UWK7 81 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 ZNF818PQ6ZRF7 136 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 C14orf144Q96I85 54 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 AQP10Q96PS8 301 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 IER3IP1Q9Y5U9 82 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 LINC00312Q9Y6C7 94 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 V9GYV3 84 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 SIPA1L3O60292 1781 aaPredicted RBP1□□□□□ -2.25
CTDSPL2-207ENST00000559738 CC2D2AQ9P2K1 1620 aa1□□□□□ -2.25
CTDSPL2-207ENST00000559738 PRDM2Q13029 1718 aa0.99□□□□□ -2.25
CTDSPL2-207ENST00000559738 TRBV7-1A0A0A6YYK4 115 aa0.99□□□□□ -2.25
CTDSPL2-207ENST00000559738 FAM24AA6NFZ4 105 aa0.99□□□□□ -2.25
CTDSPL2-207ENST00000559738 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
CTDSPL2-207ENST00000559738 C5orf38Q86SI9 138 aa0.99□□□□□ -2.25
CTDSPL2-207ENST00000559738 PSME4Q14997 1843 aa0.99□□□□□ -2.25
CTDSPL2-207ENST00000559738 LRRC37A3O60309 1634 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 SHROOM2Q13796 1616 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 A0A087WTM6 91 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 CLPSL1A2RUU4 121 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 SIX6O95475 246 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 IFITM1P13164 125 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 RBP2P50120 134 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 EDDM3BP56851 147 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 SPINK13Q1W4C9 94 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 C10orf128Q5T292 105 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 SPANXDQ9BXN6 97 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 MAPKBP1O60336 1514 aa0.98□□□□□ -2.25
CTDSPL2-207ENST00000559738 KNTC1P50748 2209 aa0.97□□□□□ -2.25
CTDSPL2-207ENST00000559738 TTC9CQ8N5M4 171 aa0.97□□□□□ -2.25
CTDSPL2-207ENST00000559738 SPHKAPQ2M3C7 1700 aa0.97□□□□□ -2.25
CTDSPL2-207ENST00000559738 ABCA3Q99758 1704 aa0.97□□□□□ -2.25
CTDSPL2-207ENST00000559738 TET3O43151 1660 aa0.97□□□□□ -2.25
CTDSPL2-207ENST00000559738 PPIP5K1Q6PFW1 1433 aa0.97□□□□□ -2.25
CTDSPL2-207ENST00000559738 F5P12259 2224 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 ZFYVE16Q7Z3T8 1539 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 UBE2L5PA0A1B0GUS4 154 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 K7EIL1 84 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 SSSCA1O60232 199 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 SPINK8P0C7L1 97 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 SMIM6P0DI80 62 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 UBE2L3P68036 154 aaKnown RBP0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 HSD52Q0P140 79 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 C6orf52Q5T4I8 152 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 COMMD6Q7Z4G1 85 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 TSLPQ969D9 159 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 TANC1Q9C0D5 1861 aa0.96□□□□□ -2.26
CTDSPL2-207ENST00000559738 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 TMEM218A2RU14 115 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 F2Z2F3 143 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 PPP1R17O96001 155 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 ACYP2P14621 99 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 ATP5EP56381 51 aaPredicted RBP0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 FXYD6P3P58550 94 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 RPL37P61927 97 aaKnown RBP0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 PI4KAP42356 2102 aa0.95□□□□□ -2.26
CTDSPL2-207ENST00000559738 IFT172Q9UG01 1749 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms