RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 NKX2-5P52952 324 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-214ENST00000559433 UBE2D3P61077 147 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 UBE2D2P62837 147 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 HSPG2P98160 4391 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
LRRC28-214ENST00000559433 TRAV8-3A0A0A6YYJ7 113 aa8.43□□□□□ -1.06
LRRC28-214ENST00000559433 DAZ4Q86SG3 579 aaKnown RBP8.43□□□□□ -1.06
LRRC28-214ENST00000559433 NEXN-AS1Q8NBZ9 246 aa8.43□□□□□ -1.06
LRRC28-214ENST00000559433 OR10G8Q8NGN5 311 aa8.43□□□□□ -1.06
LRRC28-214ENST00000559433 DAZ3Q9NR90 486 aaKnown RBP8.43□□□□□ -1.06
LRRC28-214ENST00000559433 A0A087WX48 190 aa8.42□□□□□ -1.06
LRRC28-214ENST00000559433 MGPP08493 103 aa8.42□□□□□ -1.06
LRRC28-214ENST00000559433 CACNG7P62955 275 aa8.42□□□□□ -1.06
LRRC28-214ENST00000559433 NIT1Q86X76 327 aa8.42□□□□□ -1.06
LRRC28-214ENST00000559433 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 TMEM262E9PQX1 116 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 F2Z2F3 143 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 GCSHP23434 173 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 ELOBQ15370 118 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 NUDT10Q8NFP7 164 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 RMI2Q96E14 147 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 NUDT11Q96G61 164 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 RNASE7Q9H1E1 156 aaKnown RBP8.41□□□□□ -1.06
LRRC28-214ENST00000559433 COX11Q9Y6N1 276 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 KIF25-AS1Q9Y6Z4 181 aa8.41□□□□□ -1.06
LRRC28-214ENST00000559433 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 TMEM250H0YL14 139 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 K7EN84 100 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 CEBPGP53567 150 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 LYPD6BQ8NI32 183 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 OCC1Q8TAD7 63 aa8.4□□□□□ -1.06
LRRC28-214ENST00000559433 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
LRRC28-214ENST00000559433 TRBV6-8A0A0A6YYG3 113 aa8.39□□□□□ -1.07
LRRC28-214ENST00000559433 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
LRRC28-214ENST00000559433 TRGC1P0CF51 173 aa8.39□□□□□ -1.07
LRRC28-214ENST00000559433 Q8N1X5 172 aa8.39□□□□□ -1.07
LRRC28-214ENST00000559433 NTN5Q8WTR8 489 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-214ENST00000559433 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
LRRC28-214ENST00000559433 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
LRRC28-214ENST00000559433 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
LRRC28-214ENST00000559433 H7C1H1 209 aa8.38□□□□□ -1.07
LRRC28-214ENST00000559433 CTRLP40313 264 aa8.38□□□□□ -1.07
LRRC28-214ENST00000559433 SUMO4Q6EEV6 95 aa8.38□□□□□ -1.07
LRRC28-214ENST00000559433 Q8N814 137 aa8.38□□□□□ -1.07
LRRC28-214ENST00000559433 MRPL18Q9H0U6 180 aaKnown RBP8.38□□□□□ -1.07
LRRC28-214ENST00000559433 M0QY20 66 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 NTF3P20783 257 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 PKIAP61925 76 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 TWIST1Q15672 202 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 UBE2WQ96B02 151 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 DPH3P1Q9H4G8 78 aa8.37□□□□□ -1.07
LRRC28-214ENST00000559433 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
LRRC28-214ENST00000559433 LECT2O14960 151 aa8.36□□□□□ -1.07
LRRC28-214ENST00000559433 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
LRRC28-214ENST00000559433 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
LRRC28-214ENST00000559433 FAM210AQ96ND0 272 aa8.36□□□□□ -1.07
LRRC28-214ENST00000559433 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
LRRC28-214ENST00000559433 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 GATCO43716 136 aaKnown RBP8.35□□□□□ -1.07
LRRC28-214ENST00000559433 Q0VG73 95 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 WFDC2Q14508 124 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 MPV17L2Q567V2 206 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 RASL11AQ6T310 242 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 NTM-AS1Q6ZSK4 140 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 C15orf54Q8N8G6 183 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 SMIM7Q9BQ49 75 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 CNFNQ9BYD5 112 aa8.35□□□□□ -1.07
LRRC28-214ENST00000559433 TRBV25-1A0A075B6N4 114 aa8.34□□□□□ -1.07
LRRC28-214ENST00000559433 CRPP02741 224 aa8.34□□□□□ -1.07
LRRC28-214ENST00000559433 ANGP03950 147 aaKnown RBP8.34□□□□□ -1.07
LRRC28-214ENST00000559433 FAM231DQ6ZW35 169 aa8.34□□□□□ -1.07
LRRC28-214ENST00000559433 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
LRRC28-214ENST00000559433 BAALCQ8WXS3 180 aa8.34□□□□□ -1.07
LRRC28-214ENST00000559433 IGHV1-24A0A0C4DH33 117 aa8.33□□□□□ -1.08
LRRC28-214ENST00000559433 ZNF727A8MUV8 499 aa8.33□□□□□ -1.08
LRRC28-214ENST00000559433 A8MWL6 223 aa8.33□□□□□ -1.08
LRRC28-214ENST00000559433 NDUFS6O75380 124 aaKnown RBP8.33□□□□□ -1.08
LRRC28-214ENST00000559433 GAGE6Q13070 117 aa8.33□□□□□ -1.08
LRRC28-214ENST00000559433 Q8N976 141 aa8.33□□□□□ -1.08
LRRC28-214ENST00000559433 FRZBQ92765 325 aa8.33□□□□□ -1.08
LRRC28-214ENST00000559433 SRP19P09132 144 aaKnown RBP8.32□□□□□ -1.08
LRRC28-214ENST00000559433 XGP55808 180 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 IQCJQ1A5X6 159 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 CT83Q5H943 113 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 ATRAIDQ6UW56 229 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 SMIM15Q7Z3B0 74 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 LINC01551Q86U37 167 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 PGLYRP4Q96LB8 373 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 C1orf43Q9BWL3 253 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 NIT2Q9NQR4 276 aa8.32□□□□□ -1.08
LRRC28-214ENST00000559433 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-214ENST00000559433 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
LRRC28-214ENST00000559433 RBX1P62877 108 aa8.31□□□□□ -1.08
LRRC28-214ENST00000559433 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-214ENST00000559433 ENHOQ6UWT2 76 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms