RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 DAZ4Q86SG3 579 aaKnown RBP7.32□□□□□ -1.24
SPG11-216ENST00000559347 NIT1Q86X76 327 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 TPPP3Q9BW30 176 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 BIN3Q9NQY0 253 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 DAZ3Q9NR90 486 aaKnown RBP7.32□□□□□ -1.24
SPG11-216ENST00000559347 XKRY2A2RUG3 117 aa7.31□□□□□ -1.24
SPG11-216ENST00000559347 LRCOL1A6NCL2 159 aa7.31□□□□□ -1.24
SPG11-216ENST00000559347 SMIM17P0DL12 118 aa7.31□□□□□ -1.24
SPG11-216ENST00000559347 CTRLP40313 264 aa7.31□□□□□ -1.24
SPG11-216ENST00000559347 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
SPG11-216ENST00000559347 F5H697 171 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 CACNG7P62955 275 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 TOR2AQ5JU69 321 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 NUDT10Q8NFP7 164 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 NUDT11Q96G61 164 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 CHCHD7Q9BUK0 85 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 RPP21Q9H633 154 aaKnown RBP7.3□□□□□ -1.24
SPG11-216ENST00000559347 URGCP-MRPS24S4R325 110 aa7.3□□□□□ -1.24
SPG11-216ENST00000559347 TRBV6-8A0A0A6YYG3 113 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 TRAV8-3A0A0A6YYJ7 113 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 F2Z2F3 143 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 MGPP08493 103 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 MAPKAPK5-AS1Q8N8E1 139 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 OCC1Q8TAD7 63 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
SPG11-216ENST00000559347 RNASE7Q9H1E1 156 aaKnown RBP7.29□□□□□ -1.24
SPG11-216ENST00000559347 M0QY20 66 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 TRGC1P0CF51 173 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 SUMO4Q6EEV6 95 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 FAM210AQ96ND0 272 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 TM2D2Q9BX73 214 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
SPG11-216ENST00000559347 A0A087WX48 190 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 H7C1H1 209 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 NDUFS6O75380 124 aaKnown RBP7.27□□□□□ -1.25
SPG11-216ENST00000559347 CEBPGP53567 150 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 WFDC2Q14508 124 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 Q8N814 137 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.27□□□□□ -1.25
SPG11-216ENST00000559347 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
SPG11-216ENST00000559347 DNAJC30Q96LL9 226 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 DPH3P1Q9H4G8 78 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 KLK12Q9UKR0 248 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 VPS13BQ7Z7G8 4022 aa7.27□□□□□ -1.25
SPG11-216ENST00000559347 NTF3P20783 257 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 MPV17L2Q567V2 206 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 TMEM97Q5BJF2 176 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 WDR73Q6P4I2 378 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 KCNIP4Q6PIL6 250 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 FAM231DQ6ZW35 169 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 GTSF1Q8WW33 167 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 SMIM7Q9BQ49 75 aa7.26□□□□□ -1.25
SPG11-216ENST00000559347 EIF5A2Q9GZV4 153 aaKnown RBP7.26□□□□□ -1.25
SPG11-216ENST00000559347 IGLV5-52A0A0A0MRZ9 124 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 ELOBQ15370 118 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 ATRAIDQ6UW56 229 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 Q8N1X5 172 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 UBE2WQ96B02 151 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 RMI2Q96E14 147 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 CHCHD5Q9BSY4 110 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 COX11Q9Y6N1 276 aa7.25□□□□□ -1.25
SPG11-216ENST00000559347 TRBV25-1A0A075B6N4 114 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 IGKV2D-24A0A075B6R9 120 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 GATCO43716 136 aaKnown RBP7.24□□□□□ -1.25
SPG11-216ENST00000559347 SRP19P09132 144 aaKnown RBP7.24□□□□□ -1.25
SPG11-216ENST00000559347 GCSHP23434 173 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 PKIAP61925 76 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 TWIST1Q15672 202 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 IQCJQ1A5X6 159 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 CT83Q5H943 113 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 LINC01551Q86U37 167 aa7.24□□□□□ -1.25
SPG11-216ENST00000559347 LECT2O14960 151 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 CRPP02741 224 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 XGP55808 180 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 C15orf54Q8N8G6 183 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 Q8N976 141 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 FAT1Q14517 4588 aa7.23□□□□□ -1.25
SPG11-216ENST00000559347 TRAV26-2A0A0B4J265 109 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 IGHV1-24A0A0C4DH33 117 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 ZNF727A8MUV8 499 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 A8MWL6 223 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 TMEM262E9PQX1 116 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 ANGP03950 147 aaKnown RBP7.22□□□□□ -1.25
SPG11-216ENST00000559347 Q0VG73 95 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 TEX261Q6UWH6 196 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 BAALCQ8WXS3 180 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 PGLYRP4Q96LB8 373 aa7.22□□□□□ -1.25
SPG11-216ENST00000559347 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.21□□□□□ -1.26
SPG11-216ENST00000559347 RBX1P62877 108 aa7.21□□□□□ -1.26
SPG11-216ENST00000559347 GAGE6Q13070 117 aa7.21□□□□□ -1.26
SPG11-216ENST00000559347 GATD1Q8NB37 220 aa7.21□□□□□ -1.26
SPG11-216ENST00000559347 TMEM70Q9BUB7 260 aa7.21□□□□□ -1.26
SPG11-216ENST00000559347 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms