RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 FAM162BQ5T6X4 162 aa10.41□□□□□ -0.74
CDC42BPB-205ENST00000559245 ALKAL2Q6UX46 152 aa10.41□□□□□ -0.74
CDC42BPB-205ENST00000559245 COX8CQ7Z4L0 72 aa10.41□□□□□ -0.74
CDC42BPB-205ENST00000559245 CHCHD5Q9BSY4 110 aa10.41□□□□□ -0.74
CDC42BPB-205ENST00000559245 TNXBP22105 4242 aa10.41□□□□□ -0.74
CDC42BPB-205ENST00000559245 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
CDC42BPB-205ENST00000559245 LINC01559Q495D7 138 aa10.4□□□□□ -0.74
CDC42BPB-205ENST00000559245 SDIM1Q6ZPB5 146 aa10.4□□□□□ -0.74
CDC42BPB-205ENST00000559245 NEXN-AS1Q8NBZ9 246 aa10.4□□□□□ -0.74
CDC42BPB-205ENST00000559245 HIST1H2BAQ96A08 127 aa10.4□□□□□ -0.74
CDC42BPB-205ENST00000559245 ZFP30Q9Y2G7 519 aa10.4□□□□□ -0.74
CDC42BPB-205ENST00000559245 RAB4BP61018 213 aa10.39□□□□□ -0.75
CDC42BPB-205ENST00000559245 PKIAP61925 76 aa10.39□□□□□ -0.75
CDC42BPB-205ENST00000559245 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
CDC42BPB-205ENST00000559245 ZNF674Q2M3X9 581 aa10.39□□□□□ -0.75
CDC42BPB-205ENST00000559245 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
CDC42BPB-205ENST00000559245 LRP2P98164 4655 aa10.39□□□□□ -0.75
CDC42BPB-205ENST00000559245 FAM74A7A6NL05 159 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 ZNF56Q15929 161 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 AKR1C8PQ5T2L2 129 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 KRTAP26-1Q6PEX3 210 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 MBD3L1Q8WWY6 194 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 NKX6-2Q9C056 277 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 PRR34Q9NV39 138 aa10.38□□□□□ -0.75
CDC42BPB-205ENST00000559245 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
CDC42BPB-205ENST00000559245 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
CDC42BPB-205ENST00000559245 UBE2G1P62253 170 aa10.37□□□□□ -0.75
CDC42BPB-205ENST00000559245 PRR27Q6MZM9 219 aa10.37□□□□□ -0.75
CDC42BPB-205ENST00000559245 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
CDC42BPB-205ENST00000559245 RBX1P62877 108 aa10.36□□□□□ -0.75
CDC42BPB-205ENST00000559245 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
CDC42BPB-205ENST00000559245 NTM-AS1Q6ZSK4 140 aa10.36□□□□□ -0.75
CDC42BPB-205ENST00000559245 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
CDC42BPB-205ENST00000559245 FHITP49789 147 aa10.35□□□□□ -0.75
CDC42BPB-205ENST00000559245 GAGE6Q13070 117 aa10.35□□□□□ -0.75
CDC42BPB-205ENST00000559245 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
CDC42BPB-205ENST00000559245 CLRN3Q8NCR9 226 aa10.35□□□□□ -0.75
CDC42BPB-205ENST00000559245 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
CDC42BPB-205ENST00000559245 TRBV6-1A0A0K0K1D8 114 aa10.34□□□□□ -0.75
CDC42BPB-205ENST00000559245 LTAP01374 205 aa10.34□□□□□ -0.75
CDC42BPB-205ENST00000559245 CNBPP62633 177 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-205ENST00000559245 BLOC1S1P78537 153 aa10.34□□□□□ -0.75
CDC42BPB-205ENST00000559245 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
CDC42BPB-205ENST00000559245 VAX2Q9UIW0 290 aa10.34□□□□□ -0.75
CDC42BPB-205ENST00000559245 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
CDC42BPB-205ENST00000559245 DPH3Q96FX2 82 aa10.33□□□□□ -0.76
CDC42BPB-205ENST00000559245 DERL1Q9BUN8 251 aa10.33□□□□□ -0.76
CDC42BPB-205ENST00000559245 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
CDC42BPB-205ENST00000559245 A0A087WYN8 130 aa10.32□□□□□ -0.76
CDC42BPB-205ENST00000559245 hDV102S1A0JD36 115 aa10.32□□□□□ -0.76
CDC42BPB-205ENST00000559245 F5H697 171 aa10.32□□□□□ -0.76
CDC42BPB-205ENST00000559245 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
CDC42BPB-205ENST00000559245 TRBV25-1A0A075B6N4 114 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 MAP1LC3B2A6NCE7 125 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 REG3AQ06141 175 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 MAP1LC3BQ9GZQ8 125 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 RNF213Q63HN8 5207 aa10.31□□□□□ -0.76
CDC42BPB-205ENST00000559245 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
CDC42BPB-205ENST00000559245 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
CDC42BPB-205ENST00000559245 CXCL1P09341 107 aa10.3□□□□□ -0.76
CDC42BPB-205ENST00000559245 AKR1C3P42330 323 aa10.3□□□□□ -0.76
CDC42BPB-205ENST00000559245 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
CDC42BPB-205ENST00000559245 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
CDC42BPB-205ENST00000559245 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 SNAI2O43623 268 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 SLPIP03973 132 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 IQCJQ1A5X6 159 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 CST9LP1Q5W188 147 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPB-205ENST00000559245 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
CDC42BPB-205ENST00000559245 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
CDC42BPB-205ENST00000559245 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
CDC42BPB-205ENST00000559245 P01737 135 aa10.28□□□□□ -0.76
CDC42BPB-205ENST00000559245 SSTP61278 116 aa10.28□□□□□ -0.76
CDC42BPB-205ENST00000559245 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
CDC42BPB-205ENST00000559245 TEX46H3BTG2 121 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 PHOX2AO14813 284 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 OR5AL1P0C617 328 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 RAB14P61106 215 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 PLAC8Q9NZF1 115 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
CDC42BPB-205ENST00000559245 LINC00862A6NCI5 91 aa10.26□□□□□ -0.77
CDC42BPB-205ENST00000559245 CCL20P78556 96 aa10.26□□□□□ -0.77
CDC42BPB-205ENST00000559245 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
CDC42BPB-205ENST00000559245 TAGLN2P37802 199 aaKnown RBP10.25□□□□□ -0.77
CDC42BPB-205ENST00000559245 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
CDC42BPB-205ENST00000559245 AP1S3Q96PC3 154 aa10.25□□□□□ -0.77
CDC42BPB-205ENST00000559245 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
CDC42BPB-205ENST00000559245 MANBALQ9NQG1 85 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 315.2 ms