RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
RPL28-207ENST00000558815 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
RPL28-207ENST00000558815 K7EN84 100 aa10.22□□□□□ -0.77
RPL28-207ENST00000558815 CDPF1Q6NVV7 123 aa10.22□□□□□ -0.77
RPL28-207ENST00000558815 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.22□□□□□ -0.77
RPL28-207ENST00000558815 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
RPL28-207ENST00000558815 RPP21Q9H633 154 aaKnown RBP10.22□□□□□ -0.77
RPL28-207ENST00000558815 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
RPL28-207ENST00000558815 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.77
RPL28-207ENST00000558815 F2Z2F3 143 aa10.21□□□□□ -0.77
RPL28-207ENST00000558815 TMEM250H0YL14 139 aa10.21□□□□□ -0.77
RPL28-207ENST00000558815 DNAJC30Q96LL9 226 aa10.21□□□□□ -0.77
RPL28-207ENST00000558815 TM2D2Q9BX73 214 aa10.21□□□□□ -0.77
RPL28-207ENST00000558815 TRBV6-8A0A0A6YYG3 113 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 LECT2O14960 151 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 TRGC1P0CF51 173 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 NTF3P20783 257 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 SUMO4Q6EEV6 95 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 UBE2WQ96B02 151 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 CHCHD5Q9BSY4 110 aa10.2□□□□□ -0.78
RPL28-207ENST00000558815 IGKV2D-24A0A075B6R9 120 aa10.19□□□□□ -0.78
RPL28-207ENST00000558815 IGLV5-52A0A0A0MRZ9 124 aa10.19□□□□□ -0.78
RPL28-207ENST00000558815 H7C1H1 209 aa10.19□□□□□ -0.78
RPL28-207ENST00000558815 KRTAP10-1P60331 282 aa10.19□□□□□ -0.78
RPL28-207ENST00000558815 KRTAP4-5Q9BYR2 181 aa10.19□□□□□ -0.78
RPL28-207ENST00000558815 GATCO43716 136 aaKnown RBP10.18□□□□□ -0.78
RPL28-207ENST00000558815 CTRLP40313 264 aa10.18□□□□□ -0.78
RPL28-207ENST00000558815 WFDC2Q14508 124 aa10.18□□□□□ -0.78
RPL28-207ENST00000558815 TWIST1Q15672 202 aa10.18□□□□□ -0.78
RPL28-207ENST00000558815 Q8N814 137 aa10.18□□□□□ -0.78
RPL28-207ENST00000558815 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
RPL28-207ENST00000558815 M0QY20 66 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 GCSHP23434 173 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 ELOBQ15370 118 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 MPV17L2Q567V2 206 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 RMI2Q96E14 147 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
RPL28-207ENST00000558815 GAGE6Q13070 117 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 TMEM97Q5BJF2 176 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 RASL11AQ6T310 242 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 C15orf54Q8N8G6 183 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 DEFB104AQ8WTQ1 72 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
RPL28-207ENST00000558815 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
RPL28-207ENST00000558815 ZNF727A8MUV8 499 aa10.15□□□□□ -0.78
RPL28-207ENST00000558815 CRPP02741 224 aa10.15□□□□□ -0.78
RPL28-207ENST00000558815 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.78
RPL28-207ENST00000558815 Q8N976 141 aa10.15□□□□□ -0.78
RPL28-207ENST00000558815 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.78
RPL28-207ENST00000558815 GTSF1Q8WW33 167 aa10.15□□□□□ -0.78
RPL28-207ENST00000558815 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
RPL28-207ENST00000558815 PCLOQ9Y6V0 5065 aa10.14□□□□□ -0.79
RPL28-207ENST00000558815 TRBV25-1A0A075B6N4 114 aa10.14□□□□□ -0.79
RPL28-207ENST00000558815 SRP19P09132 144 aaKnown RBP10.14□□□□□ -0.79
RPL28-207ENST00000558815 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
RPL28-207ENST00000558815 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
RPL28-207ENST00000558815 CLPSL2Q6UWE3 100 aa10.14□□□□□ -0.79
RPL28-207ENST00000558815 COX11Q9Y6N1 276 aa10.14□□□□□ -0.79
RPL28-207ENST00000558815 IGHV1-24A0A0C4DH33 117 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 A8MWL6 223 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 PKIAP61925 76 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 HAMPP81172 84 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 SMIM15Q7Z3B0 74 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 Q8N1X5 172 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 C1orf43Q9BWL3 253 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 NIT2Q9NQR4 276 aa10.13□□□□□ -0.79
RPL28-207ENST00000558815 TRAV26-2A0A0B4J265 109 aa10.12□□□□□ -0.79
RPL28-207ENST00000558815 Q0VG73 95 aa10.12□□□□□ -0.79
RPL28-207ENST00000558815 LINC01551Q86U37 167 aa10.12□□□□□ -0.79
RPL28-207ENST00000558815 CNFNQ9BYD5 112 aa10.12□□□□□ -0.79
RPL28-207ENST00000558815 FOXA3P55318 350 aaPredicted RBP10.11□□□□□ -0.79
RPL28-207ENST00000558815 XGP55808 180 aa10.11□□□□□ -0.79
RPL28-207ENST00000558815 RBX1P62877 108 aa10.11□□□□□ -0.79
RPL28-207ENST00000558815 ENHOQ6UWT2 76 aa10.11□□□□□ -0.79
RPL28-207ENST00000558815 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
RPL28-207ENST00000558815 ABCA13Q86UQ4 5058 aa10.1□□□□□ -0.79
RPL28-207ENST00000558815 IQCJQ1A5X6 159 aa10.1□□□□□ -0.79
RPL28-207ENST00000558815 GATD1Q8NB37 220 aa10.1□□□□□ -0.79
RPL28-207ENST00000558815 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
RPL28-207ENST00000558815 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
RPL28-207ENST00000558815 CT83Q5H943 113 aa10.09□□□□□ -0.79
RPL28-207ENST00000558815 TEX261Q6UWH6 196 aa10.09□□□□□ -0.79
RPL28-207ENST00000558815 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
RPL28-207ENST00000558815 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
RPL28-207ENST00000558815 HIGD1CA8MV81 97 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 UBE2L6O14933 153 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 AMTP48728 403 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 COTL1Q14019 142 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 OSTCQ9NRP0 149 aa10.08□□□□□ -0.8
RPL28-207ENST00000558815 C9JQL5 133 aa10.07□□□□□ -0.8
RPL28-207ENST00000558815 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
RPL28-207ENST00000558815 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
RPL28-207ENST00000558815 ADIRFQ15847 76 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms