RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 F5H697 171 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 PLA2G1BP04054 148 aaKnown RBP10.21□□□□□ -0.77
RPL28-206ENST00000558752 UBE2D3P61077 147 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 UBE2D2P62837 147 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 ZNF56Q15929 161 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 NUDT11Q96G61 164 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 TM2D2Q9BX73 214 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 KIF25-AS1Q9Y6Z4 181 aa10.21□□□□□ -0.77
RPL28-206ENST00000558752 A0A1B0GVG6 124 aa10.2□□□□□ -0.78
RPL28-206ENST00000558752 ELOBQ15370 118 aa10.2□□□□□ -0.78
RPL28-206ENST00000558752 OCC1Q8TAD7 63 aa10.2□□□□□ -0.78
RPL28-206ENST00000558752 TPPP3Q9BW30 176 aa10.2□□□□□ -0.78
RPL28-206ENST00000558752 URGCP-MRPS24S4R325 110 aa10.2□□□□□ -0.78
RPL28-206ENST00000558752 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
RPL28-206ENST00000558752 MUC21A0A0G2JKD1 596 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 MUC21A0A140T8X8 626 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 H7C1H1 209 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 IGHV3-30P01768 117 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 IGHV3-33P01772 117 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 TRGC1P0CF51 173 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 IGHV3-30-3P0DP02 117 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 IGHV3-30-5P0DP03 117 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 GZMBP10144 247 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 NKX2-5P52952 324 aaPredicted RBP10.19□□□□□ -0.78
RPL28-206ENST00000558752 KCNIP4Q6PIL6 250 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 DAZ4Q86SG3 579 aaKnown RBP10.19□□□□□ -0.78
RPL28-206ENST00000558752 Q8N814 137 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 DNAJC30Q96LL9 226 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 EIF5A2Q9GZV4 153 aaKnown RBP10.19□□□□□ -0.78
RPL28-206ENST00000558752 DAZ3Q9NR90 486 aaKnown RBP10.19□□□□□ -0.78
RPL28-206ENST00000558752 COX11Q9Y6N1 276 aa10.19□□□□□ -0.78
RPL28-206ENST00000558752 LRCOL1A6NCL2 159 aa10.18□□□□□ -0.78
RPL28-206ENST00000558752 SSTP61278 116 aa10.18□□□□□ -0.78
RPL28-206ENST00000558752 PKIAP61925 76 aa10.18□□□□□ -0.78
RPL28-206ENST00000558752 NIT1Q86X76 327 aa10.18□□□□□ -0.78
RPL28-206ENST00000558752 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
RPL28-206ENST00000558752 LYZL1Q6UWQ5 148 aa10.17□□□□□ -0.78
RPL28-206ENST00000558752 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
RPL28-206ENST00000558752 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
RPL28-206ENST00000558752 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
RPL28-206ENST00000558752 RPP21Q9H633 154 aaKnown RBP10.17□□□□□ -0.78
RPL28-206ENST00000558752 A0A087WX48 190 aa10.16□□□□□ -0.78
RPL28-206ENST00000558752 TRBV6-8A0A0A6YYG3 113 aa10.16□□□□□ -0.78
RPL28-206ENST00000558752 K7EN84 100 aa10.16□□□□□ -0.78
RPL28-206ENST00000558752 NTF3P20783 257 aa10.16□□□□□ -0.78
RPL28-206ENST00000558752 RMI2Q96E14 147 aa10.16□□□□□ -0.78
RPL28-206ENST00000558752 Q9HAA7 133 aa10.16□□□□□ -0.78
RPL28-206ENST00000558752 A8MWL6 223 aa10.15□□□□□ -0.78
RPL28-206ENST00000558752 CTRLP40313 264 aa10.15□□□□□ -0.78
RPL28-206ENST00000558752 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
RPL28-206ENST00000558752 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
RPL28-206ENST00000558752 M0QY20 66 aa10.14□□□□□ -0.79
RPL28-206ENST00000558752 GATCO43716 136 aaKnown RBP10.14□□□□□ -0.79
RPL28-206ENST00000558752 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
RPL28-206ENST00000558752 HAMPP81172 84 aa10.14□□□□□ -0.79
RPL28-206ENST00000558752 CT83Q5H943 113 aa10.14□□□□□ -0.79
RPL28-206ENST00000558752 SMIM15Q7Z3B0 74 aa10.14□□□□□ -0.79
RPL28-206ENST00000558752 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
RPL28-206ENST00000558752 TMEM262E9PQX1 116 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 Q0VG73 95 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 TWIST1Q15672 202 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 FAM74A3Q4VXF1 159 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 SMIM7Q9BQ49 75 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 SMDT1Q9H4I9 107 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 HMCN2Q8NDA2 5059 aa10.13□□□□□ -0.79
RPL28-206ENST00000558752 ZNF727A8MUV8 499 aa10.12□□□□□ -0.79
RPL28-206ENST00000558752 MGPP08493 103 aa10.12□□□□□ -0.79
RPL28-206ENST00000558752 CEBPGP53567 150 aa10.12□□□□□ -0.79
RPL28-206ENST00000558752 RASL11AQ6T310 242 aa10.12□□□□□ -0.79
RPL28-206ENST00000558752 TEX261Q6UWH6 196 aa10.12□□□□□ -0.79
RPL28-206ENST00000558752 NIT2Q9NQR4 276 aa10.12□□□□□ -0.79
RPL28-206ENST00000558752 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
RPL28-206ENST00000558752 KRTAP29-1A8MX34 341 aaPredicted RBP10.11□□□□□ -0.79
RPL28-206ENST00000558752 SRP19P09132 144 aaKnown RBP10.11□□□□□ -0.79
RPL28-206ENST00000558752 SUMO4Q6EEV6 95 aa10.11□□□□□ -0.79
RPL28-206ENST00000558752 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
RPL28-206ENST00000558752 TRBV25-1A0A075B6N4 114 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 PEA15Q15121 130 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 Q8N3U1 123 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 OSTCQ9NRP0 149 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 FAM30AQ9NZY2 134 aa10.1□□□□□ -0.79
RPL28-206ENST00000558752 IGHV1-24A0A0C4DH33 117 aa10.09□□□□□ -0.79
RPL28-206ENST00000558752 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
RPL28-206ENST00000558752 TMEM241Q24JQ0 296 aa10.09□□□□□ -0.79
RPL28-206ENST00000558752 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
RPL28-206ENST00000558752 BORCS7Q96B45 105 aa10.09□□□□□ -0.79
RPL28-206ENST00000558752 ATRAIDQ6UW56 229 aa10.08□□□□□ -0.8
RPL28-206ENST00000558752 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
RPL28-206ENST00000558752 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
RPL28-206ENST00000558752 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
RPL28-206ENST00000558752 UBE2WQ96B02 151 aa10.08□□□□□ -0.8
RPL28-206ENST00000558752 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms