RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 IGHV3-30-5P0DP03 117 aa9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 BRCA2P51587 3418 aa9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 NSUN5P1Q3KNT7 163 aa9.03□□□□□ -0.96
CSPG4P12-201ENST00000558282 KMT2EQ8IZD2 1858 aa9.03□□□□□ -0.96
CSPG4P12-201ENST00000558282 LHBP01229 141 aa9.03□□□□□ -0.96
CSPG4P12-201ENST00000558282 RNF114Q9Y508 228 aa9.03□□□□□ -0.96
CSPG4P12-201ENST00000558282 CSDC2Q9Y534 153 aaKnown RBP9.03□□□□□ -0.96
CSPG4P12-201ENST00000558282 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
CSPG4P12-201ENST00000558282 SPRY2O43597 315 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 RNF138Q8WVD3 245 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 UBE2DNLQ8IWF7 75 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 EML6Q6ZMW3 1958 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 Q8N976 141 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 NRGNQ92686 78 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 VPREB3Q9UKI3 123 aa9.02□□□□□ -0.97
CSPG4P12-201ENST00000558282 WDR87Q6ZQQ6 2873 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 PLXNA4Q9HCM2 1894 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 A0A0C4DFX4 3053 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 SEC61GP60059 68 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 BDP1A6H8Y1 2624 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 ZNF22P17026 224 aaPredicted RBP9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 LINC00308Q8TCZ7 52 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 BPESC1Q9GZL8 116 aa9.01□□□□□ -0.97
CSPG4P12-201ENST00000558282 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
CSPG4P12-201ENST00000558282 COX7BP24311 80 aa9□□□□□ -0.97
CSPG4P12-201ENST00000558282 USF3Q68DE3 2245 aa9□□□□□ -0.97
CSPG4P12-201ENST00000558282 CAMK2N2Q96S95 79 aa9□□□□□ -0.97
CSPG4P12-201ENST00000558282 IGKV1D-37A0A075B6S9 117 aa8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 GNLYP22749 145 aa8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 CLPSL2Q6UWE3 100 aa8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 IGLV2-23P01705 113 aa8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 LINC01356Q8N9X3 169 aa8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 YLPM1P49750 1951 aaKnown RBP8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
CSPG4P12-201ENST00000558282 NDUFA1O15239 70 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 NCR3O14931 201 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 MSMBP08118 114 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 TRAV7A0A075B6U4 112 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 RUSC1-AS1Q66K80 236 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 IGHV7-81A0A0B4J1V7 117 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 A6NED7 52 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 K7EMT4 169 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 WT1P19544 449 aaPredicted RBP8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 APOC4P55056 127 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 TCF20Q9UGU0 1960 aaKnown RBP8.98□□□□□ -0.97
CSPG4P12-201ENST00000558282 LINC00310P59036 64 aa8.97□□□□□ -0.97
CSPG4P12-201ENST00000558282 TIRAPP58753 221 aa8.97□□□□□ -0.97
CSPG4P12-201ENST00000558282 NACAE9PAV3 2078 aa8.97□□□□□ -0.97
CSPG4P12-201ENST00000558282 H7C423 109 aa8.97□□□□□ -0.97
CSPG4P12-201ENST00000558282 UBE2AP49459 152 aa8.97□□□□□ -0.97
CSPG4P12-201ENST00000558282 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 TMEM105Q8N8V8 129 aa8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 TMEM263Q8WUH6 116 aaKnown RBP8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 SNURFQ9Y675 71 aa8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 PLXNA2O75051 1894 aa8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 A0A0J9YX75 114 aa8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 LY6HO94772 140 aa8.96□□□□□ -0.98
CSPG4P12-201ENST00000558282 CTSZQ9UBR2 303 aa8.95□□□□□ -0.98
CSPG4P12-201ENST00000558282 MYCNOSP40205 109 aa8.95□□□□□ -0.98
CSPG4P12-201ENST00000558282 PLXND1Q9Y4D7 1925 aa8.95□□□□□ -0.98
CSPG4P12-201ENST00000558282 MIFP14174 115 aa8.95□□□□□ -0.98
CSPG4P12-201ENST00000558282 PMAIP1Q13794 54 aa8.95□□□□□ -0.98
CSPG4P12-201ENST00000558282 RNF185Q96GF1 192 aa8.95□□□□□ -0.98
CSPG4P12-201ENST00000558282 IGLV4-3A0A075B6K6 122 aa8.94□□□□□ -0.98
CSPG4P12-201ENST00000558282 SHISA2Q6UWI4 295 aa8.94□□□□□ -0.98
CSPG4P12-201ENST00000558282 PYGO1Q9Y3Y4 419 aa8.94□□□□□ -0.98
CSPG4P12-201ENST00000558282 UBE2D3P61077 147 aa8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 UBE2D2P62837 147 aa8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 Q6ZQT7 251 aa8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 ODF3Q96PU9 254 aa8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 NUP210Q8TEM1 1887 aaPredicted RBP8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 J3QLI3 93 aa8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 SPAG11BQ08648 103 aa8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 LAMA2P24043 3122 aaKnown RBP8.93□□□□□ -0.98
CSPG4P12-201ENST00000558282 LAMA3Q16787 3333 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 TRBV27A0A0K0K1C4 114 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 UBE2D1P51668 147 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 GYPEP15421 78 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 HOXB4P17483 251 aaPredicted RBP8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 SP5Q6BEB4 398 aaPredicted RBP8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 RITA1Q96K30 269 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 CDKN2A-AS1Q9UH64 79 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 K7ERS5 55 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 PRSS33Q8NF86 280 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 RETNQ9HD89 108 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 SPG11Q96JI7 2443 aa8.92□□□□□ -0.98
CSPG4P12-201ENST00000558282 A0A096LPF7 62 aa8.91□□□□□ -0.98
CSPG4P12-201ENST00000558282 E7EUB6 86 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms