RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 RASL11AQ6T310 242 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-204ENST00000558172 GATD1Q8NB37 220 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 ATP6V0E2Q8NHE4 81 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 NIT2Q9NQR4 276 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 LINC00694P0DN24 101 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 TIRAPP58753 221 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 ESRGQ1W209 222 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 LYPD5Q6UWN5 251 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 MRAP2Q96G30 205 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 LYSTQ99698 3801 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 TNFRSF18Q9Y5U5 241 aa7.25□□□□□ -1.25
LRRC28-204ENST00000558172 LY6G6CO95867 125 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 PPP1R17O96001 155 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 UBE2D3P61077 147 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 UBE2D2P62837 147 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 COX19Q49B96 90 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 AMN1Q8IY45 258 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 NEXN-AS1Q8NBZ9 246 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 RNF185Q96GF1 192 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 Q9UF83 564 aa7.24□□□□□ -1.25
LRRC28-204ENST00000558172 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
LRRC28-204ENST00000558172 LCE6AA0A183 80 aa7.23□□□□□ -1.25
LRRC28-204ENST00000558172 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
LRRC28-204ENST00000558172 DAZ4Q86SG3 579 aaKnown RBP7.23□□□□□ -1.25
LRRC28-204ENST00000558172 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
LRRC28-204ENST00000558172 DAZ3Q9NR90 486 aaKnown RBP7.23□□□□□ -1.25
LRRC28-204ENST00000558172 MRPS16Q9Y3D3 137 aaKnown RBP7.23□□□□□ -1.25
LRRC28-204ENST00000558172 LINC00588Q9Y4M8 146 aa7.23□□□□□ -1.25
LRRC28-204ENST00000558172 URGCP-MRPS24S4R325 110 aa7.23□□□□□ -1.25
LRRC28-204ENST00000558172 TRAV26-2A0A0B4J265 109 aa7.22□□□□□ -1.25
LRRC28-204ENST00000558172 PPBPP02775 128 aa7.22□□□□□ -1.25
LRRC28-204ENST00000558172 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
LRRC28-204ENST00000558172 TRBV6-5A0A0K0K1A5 114 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 CKS2P33552 79 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 ELOBQ15370 118 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 OR10J3Q5JRS4 329 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 LELP1Q5T871 98 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 GNB1LQ9BYB4 327 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 SMCO4Q9NRQ5 59 aa7.21□□□□□ -1.26
LRRC28-204ENST00000558172 DNAH6Q9C0G6 4158 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 TRBV24-1A0A075B6N3 115 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 HLA-DQA1P01909 254 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 MT-ND6P03923 174 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 TMEM136Q6ZRR5 245 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 RPL39LQ96EH5 51 aaKnown RBP7.2□□□□□ -1.26
LRRC28-204ENST00000558172 ST20Q9HBF5 79 aa7.2□□□□□ -1.26
LRRC28-204ENST00000558172 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
LRRC28-204ENST00000558172 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
LRRC28-204ENST00000558172 PHOX2AO14813 284 aa7.19□□□□□ -1.26
LRRC28-204ENST00000558172 SIVA1O15304 175 aa7.19□□□□□ -1.26
LRRC28-204ENST00000558172 ORMDL3Q8N138 153 aa7.19□□□□□ -1.26
LRRC28-204ENST00000558172 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
LRRC28-204ENST00000558172 Q9H8V8 135 aa7.19□□□□□ -1.26
LRRC28-204ENST00000558172 TRBV6-8A0A0A6YYG3 113 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 TGIF2-C20orf24A0A0A6YYL0 155 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 IGHV3-38A0A0C4DH36 116 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 D6R8Y8 96 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 SMKR1H3BMG3 65 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 I3L3M4 83 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 GAS8-AS1O95177 125 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 NCR2O95944 276 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 S100A1P23297 94 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 POLR2KP53803 58 aaKnown RBP7.18□□□□□ -1.26
LRRC28-204ENST00000558172 NRACQ8N912 160 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 LAMTOR2Q9Y2Q5 125 aa7.18□□□□□ -1.26
LRRC28-204ENST00000558172 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 K7EP13 123 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 VCYO14598 125 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 APCSP02743 223 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 PMCHP20382 165 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 RPS10P46783 165 aaKnown RBP7.17□□□□□ -1.26
LRRC28-204ENST00000558172 SUMO2P61956 95 aaKnown RBP7.17□□□□□ -1.26
LRRC28-204ENST00000558172 RPL32P62910 135 aaKnown RBP7.17□□□□□ -1.26
LRRC28-204ENST00000558172 COTL1Q14019 142 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 YPEL4Q96NS1 127 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 TMEM70Q9BUB7 260 aa7.17□□□□□ -1.26
LRRC28-204ENST00000558172 KMT2AQ03164 3969 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 TRAV9-2A0A087WT02 112 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 TRBV27A0A0K0K1C4 114 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 TCAPO15273 167 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 PKIAP61925 76 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 IQCJQ1A5X6 159 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 CBLN2Q8IUK8 224 aa7.16□□□□□ -1.26
LRRC28-204ENST00000558172 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
LRRC28-204ENST00000558172 PRSS47A8MTI9 375 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 DNAH10OSP0CZ25 163 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 FABP9Q0Z7S8 132 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 TTC32Q5I0X7 151 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 LINC01556Q5JQF7 62 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms