RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 ZNF324O75467 553 aaPredicted RBP5.25□□□□□ -1.57
SPG11-205ENST00000558080 APCSP02743 223 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 ZNF80P51504 273 aaPredicted RBP5.25□□□□□ -1.57
SPG11-205ENST00000558080 CCL18P55774 89 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 COA6Q5JTJ3 125 aaKnown RBP5.25□□□□□ -1.57
SPG11-205ENST00000558080 PRR9Q5T870 116 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 Q6ZQT7 251 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 LINC00612Q8N6U2 182 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 FAM19A4Q96LR4 140 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 LINC00588Q9Y4M8 146 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 HERC2O95714 4834 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 TRGV1A0A0A0MS02 117 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 TRAV21A0A0B4J279 112 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 NBDYA0A0U1RRE5 68 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 KLLNB2CW77 178 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 ORM1P02763 201 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 GZMBP10144 247 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 CRISP2P16562 243 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 CAMPP49913 170 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 AKR1D1P51857 326 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 DAZ2Q13117 558 aaKnown RBP5.24□□□□□ -1.57
SPG11-205ENST00000558080 ZFAND2AQ8N6M9 145 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 FER1L6-AS1Q8NA97 138 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 C11orf72Q8NBR9 251 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 ZNRF2Q8NHG8 242 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 TP53TG3Q9ULZ0 132 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 PKD1P98161 4303 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
SPG11-205ENST00000558080 TRGV2A0A075B6R0 118 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 IGHV1OR15-1A0A075B7D0 117 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 TMSB15BA0A087X1C1 80 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 F2Z2F3 143 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 S100A2P29034 98 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 CTRLP40313 264 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 Q0VG73 95 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 ANXA2RQ3ZCQ2 193 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 HIST3H2BBQ8N257 126 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 LINC00467Q9BRT7 94 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 TPPP3Q9BW30 176 aa5.23□□□□□ -1.57
SPG11-205ENST00000558080 IGHV3-53P01767 116 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 ARMS2P0C7Q2 107 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 IGLC6P0CF74 106 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 ESRGQ1W209 222 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 OR10J3Q5JRS4 329 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 MUC21Q5SSG8 566 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 LYZL1Q6UWQ5 148 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 C6orf223Q8N319 242 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 VSIG2Q96IQ7 327 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 Q9H8V8 135 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 MRPL16Q9NX20 251 aaKnown RBP5.22□□□□□ -1.57
SPG11-205ENST00000558080 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
SPG11-205ENST00000558080 A0A096LPF7 62 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 GRIFINA4D1Z8 144 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 SRIP30626 198 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 CACNG7P62955 275 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 SLAQ13239 276 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 KIAA1644Q3SXP7 199 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 BAGE3Q86Y29 109 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 CNFNQ9BYD5 112 aa5.21□□□□□ -1.58
SPG11-205ENST00000558080 IGKV3D-20A0A0C4DH25 116 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 H3BNG1 76 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 OR5AL1P0C617 328 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 SMIM6P0DI80 62 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 ESDP10768 282 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 ASIPP42127 132 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 ZNF415Q09FC8 603 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 TWIST1Q15672 202 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 TMEM18Q96B42 140 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 KCNS1Q96KK3 526 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 HIST1H2BLQ99880 126 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 ALKBH7Q9BT30 221 aaPredicted RBP5.2□□□□□ -1.58
SPG11-205ENST00000558080 MDFICQ9P1T7 246 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 NAGKQ9UJ70 344 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 MRPS16Q9Y3D3 137 aaKnown RBP5.2□□□□□ -1.58
SPG11-205ENST00000558080 DNAH11Q96DT5 4516 aa5.2□□□□□ -1.58
SPG11-205ENST00000558080 IFITM10A6NMD0 228 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 SNAI2O43623 268 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 SERF1AO75920 110 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 FABP4P15090 132 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 S100A4P26447 101 aaKnown RBP5.19□□□□□ -1.58
SPG11-205ENST00000558080 DNLZQ5SXM8 178 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 FAM159AQ6UWV7 190 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 SMIM15Q7Z3B0 74 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 LINC00518Q8N0U6 118 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 PACRGQ96M98 296 aaPredicted RBP5.19□□□□□ -1.58
SPG11-205ENST00000558080 C18orf15Q96N68 181 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 KRTAP1-5Q9BYS1 174 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 TMEM191AQ9H0A3 160 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 ICOSQ9Y6W8 199 aa5.19□□□□□ -1.58
SPG11-205ENST00000558080 DYNC1H1Q14204 4646 aaKnown RBP5.18□□□□□ -1.58
SPG11-205ENST00000558080 TRGV4A0A0C4DH28 118 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 H3BVH4 76 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 GNRH2O43555 120 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 NTF3P20783 257 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 CRYBA4P53673 196 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 TTC32Q5I0X7 151 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 SPANXN1Q5VSR9 72 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms