RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 H7C2G1 150 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 I3L3M4 83 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 IGHV4-38-2P0DP08 117 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 ATRXP46100 2492 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 IGHV1OR15-1A0A075B7D0 117 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 IGHV4-39P01824 125 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 Q1RN00 199 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 Q8N1Y9 231 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 SPTAN1Q13813 2472 aaKnown RBP8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 TRAV12-2A0A075B6T6 113 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 M0R2P5 195 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 ATXN8Q156A1 80 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 HIVEP3Q5T1R4 2406 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 IGLV4-3A0A075B6K6 122 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 IGKV3-20P01619 116 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 SNRPD3P62318 126 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 Q5PR19 223 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 ZFAND6Q6FIF0 208 aa8.75□□□□□ -1.01
VIPAS39-211ENST00000557658 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
VIPAS39-211ENST00000557658 CFHR3Q02985 330 aa8.74□□□□□ -1.01
VIPAS39-211ENST00000557658 TEX29Q8N6K0 151 aa8.74□□□□□ -1.01
VIPAS39-211ENST00000557658 PIMREGQ9BSJ6 248 aa8.74□□□□□ -1.01
VIPAS39-211ENST00000557658 IGHV4-61A0A0C4DH41 118 aa8.73□□□□□ -1.01
VIPAS39-211ENST00000557658 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
VIPAS39-211ENST00000557658 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 SPINK13Q1W4C9 94 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 RNF183Q96D59 192 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 ANAPC13Q9BS18 74 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 TIMM21Q9BVV7 248 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 TRGV11A0A075B6L2 103 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 NTN5Q8WTR8 489 aaPredicted RBP8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 CITED1Q99966 193 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 SPXQ9BT56 116 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 PYGO1Q9Y3Y4 419 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 IGF2RP11717 2491 aa8.72□□□□□ -1.01
VIPAS39-211ENST00000557658 K7EQG2 157 aa8.71□□□□□ -1.01
VIPAS39-211ENST00000557658 CD28P10747 220 aa8.71□□□□□ -1.01
VIPAS39-211ENST00000557658 ZNF580Q9UK33 172 aa8.71□□□□□ -1.01
VIPAS39-211ENST00000557658 LINC01600Q96MT4 127 aa8.71□□□□□ -1.02
VIPAS39-211ENST00000557658 ZFHX3Q15911 3703 aa8.71□□□□□ -1.02
VIPAS39-211ENST00000557658 PRRC2AP48634 2157 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 ELANEP08246 267 aa8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 BEX4Q9NWD9 120 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 SNCGO76070 127 aa8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 PRSS2P07478 247 aa8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 MRPS36P82909 103 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-211ENST00000557658 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 TRIAP1O43715 76 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 PSMB8P28062 276 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 RPL13AP40429 203 aaKnown RBP8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 LITAFQ99732 161 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 C10orf105Q8TEF2 133 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 EDA2RQ9HAV5 297 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
VIPAS39-211ENST00000557658 GAGE2BQ13066 116 aa8.68□□□□□ -1.02
VIPAS39-211ENST00000557658 GAGE2EQ4V326 116 aa8.68□□□□□ -1.02
VIPAS39-211ENST00000557658 GAGE2DQ9UEU5 116 aa8.68□□□□□ -1.02
VIPAS39-211ENST00000557658 TRAV8-4A0A0B4J246 113 aa8.68□□□□□ -1.02
VIPAS39-211ENST00000557658 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
VIPAS39-211ENST00000557658 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
VIPAS39-211ENST00000557658 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 H3BMM0 161 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 COX6CP09669 75 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 RNF152Q8N8N0 203 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 UBE2WQ96B02 151 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 TEX49A0A1B0GTD5 131 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 MSMBP08118 114 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 FAM104AQ969W3 186 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 DOPEY2Q9Y3R5 2298 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 MIAQ16674 131 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
VIPAS39-211ENST00000557658 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 TMEM89A2RUT3 159 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 GAGE5Q13069 117 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 GAGE6Q13070 117 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 CCL19Q99731 98 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 YAE1D1Q9NRH1 226 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 TRAV4A0A0B4J268 109 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 GATA3P23771 443 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 SYNJ2BPP57105 145 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 SPANXA1Q9NS26 97 aa8.66□□□□□ -1.02
VIPAS39-211ENST00000557658 SORL1Q92673 2214 aa8.65□□□□□ -1.02
VIPAS39-211ENST00000557658 H3BT86 120 aa8.65□□□□□ -1.02
VIPAS39-211ENST00000557658 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
VIPAS39-211ENST00000557658 Q6Q795 121 aa8.65□□□□□ -1.02
VIPAS39-211ENST00000557658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■■■■□ 24
VIPAS39-211ENST00000557658 CRLF1O75462 422 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms