RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 OR10G8Q8NGN5 311 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 ANAPC16Q96DE5 110 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 Q9UF83 564 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 DNAH10Q8IVF4 4471 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
SLIRP-211ENST00000557623 H7C1H1 209 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 MGPP08493 103 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 UBE2D3P61077 147 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 UBE2D2P62837 147 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 TWIST1Q15672 202 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 DPH3P1Q9H4G8 78 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 OSTCQ9NRP0 149 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
SLIRP-211ENST00000557623 GTSF1Q8WW33 167 aa8.47□□□□□ -1.05
SLIRP-211ENST00000557623 BORCS7Q96B45 105 aa8.47□□□□□ -1.05
SLIRP-211ENST00000557623 NAT8Q9UHE5 227 aa8.47□□□□□ -1.05
SLIRP-211ENST00000557623 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
SLIRP-211ENST00000557623 C9JQL5 133 aa8.46□□□□□ -1.06
SLIRP-211ENST00000557623 FOXA3P55318 350 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-211ENST00000557623 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
SLIRP-211ENST00000557623 DNAJC30Q96LL9 226 aa8.46□□□□□ -1.06
SLIRP-211ENST00000557623 GFRA4Q9GZZ7 299 aa8.46□□□□□ -1.06
SLIRP-211ENST00000557623 KRTAP9-6A0A140TA67 174 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 RPL23P62829 140 aaKnown RBP8.45□□□□□ -1.06
SLIRP-211ENST00000557623 SRSF3P84103 164 aaKnown RBP8.45□□□□□ -1.06
SLIRP-211ENST00000557623 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 SUMO4Q6EEV6 95 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 DAZ4Q86SG3 579 aaKnown RBP8.45□□□□□ -1.06
SLIRP-211ENST00000557623 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 PGLYRP4Q96LB8 373 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 KRTAP4-12Q9BQ66 201 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 DAZ3Q9NR90 486 aaKnown RBP8.45□□□□□ -1.06
SLIRP-211ENST00000557623 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 URGCP-MRPS24S4R325 110 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 DNAH2Q9P225 4427 aa8.45□□□□□ -1.06
SLIRP-211ENST00000557623 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
SLIRP-211ENST00000557623 M0QY20 66 aa8.44□□□□□ -1.06
SLIRP-211ENST00000557623 ADIRFQ15847 76 aa8.44□□□□□ -1.06
SLIRP-211ENST00000557623 KCNIP4Q6PIL6 250 aa8.44□□□□□ -1.06
SLIRP-211ENST00000557623 RASL11AQ6T310 242 aa8.44□□□□□ -1.06
SLIRP-211ENST00000557623 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
SLIRP-211ENST00000557623 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
SLIRP-211ENST00000557623 HIGD1CA8MV81 97 aa8.43□□□□□ -1.06
SLIRP-211ENST00000557623 LAGE3Q14657 143 aa8.43□□□□□ -1.06
SLIRP-211ENST00000557623 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
SLIRP-211ENST00000557623 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 PKIAP61925 76 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 NIT1Q86X76 327 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 FRZBQ92765 325 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 V9GYV3 84 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
SLIRP-211ENST00000557623 A0A087WX48 190 aa8.41□□□□□ -1.06
SLIRP-211ENST00000557623 ELOBQ15370 118 aa8.41□□□□□ -1.06
SLIRP-211ENST00000557623 NAT8BQ9UHF3 227 aa8.41□□□□□ -1.06
SLIRP-211ENST00000557623 FAT2Q9NYQ8 4349 aa8.4□□□□□ -1.06
SLIRP-211ENST00000557623 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.06
SLIRP-211ENST00000557623 PSCAO43653 123 aa8.4□□□□□ -1.06
SLIRP-211ENST00000557623 RIGQ13278 110 aa8.4□□□□□ -1.06
SLIRP-211ENST00000557623 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
SLIRP-211ENST00000557623 BIRC6Q9NR09 4857 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 TRBV25-1A0A075B6N4 114 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 NUP35Q8NFH5 326 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 TMEM191AQ9H0A3 160 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 Q9HAA7 133 aa8.39□□□□□ -1.07
SLIRP-211ENST00000557623 IGHV1-24A0A0C4DH33 117 aa8.38□□□□□ -1.07
SLIRP-211ENST00000557623 SMIM27A0A1W2PRY6 76 aa8.38□□□□□ -1.07
SLIRP-211ENST00000557623 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
SLIRP-211ENST00000557623 GATD1Q8NB37 220 aa8.38□□□□□ -1.07
SLIRP-211ENST00000557623 A0A087WTM6 91 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 IFITM2Q01629 132 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 PNRC1Q12796 327 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-211ENST00000557623 IQCJQ1A5X6 159 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 RMI2Q96E14 147 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
SLIRP-211ENST00000557623 PPP1R2P9O14990 202 aa8.36□□□□□ -1.07
SLIRP-211ENST00000557623 Q0VG73 95 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms