RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PHLDA3Q9Y5J5 127 aa5.61□□□□□ -1.51
VRK1-206ENST00000557222 TRBV6-8A0A0A6YYG3 113 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 TRAV34A0A0B4J273 112 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 TRBV6-1A0A0K0K1D8 114 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 H3BVH4 76 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 PEX7O00628 323 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 IFNA7P01567 189 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 TPT1P13693 172 aaKnown RBP5.6□□□□□ -1.51
VRK1-206ENST00000557222 CRIP1P50238 77 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 RPL37AP61513 92 aaKnown RBP5.6□□□□□ -1.51
VRK1-206ENST00000557222 TMEM97Q5BJF2 176 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 FAM162BQ5T6X4 162 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 Q86TA4 180 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 ZFP82Q8N141 532 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.6□□□□□ -1.51
VRK1-206ENST00000557222 DNAJC30Q96LL9 226 aa5.6□□□□□ -1.51
VRK1-206ENST00000557222 CTXND1A0A1B0GTU2 59 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 TMEM262E9PQX1 116 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 CRPP02741 224 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 RAB4BP61018 213 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 MIAQ16674 131 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 ZNF674Q2M3X9 581 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 FAM74A4Q5TZK3 123 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 ENHOQ6UWT2 76 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 ZC2HC1AQ96GY0 325 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 FMC1Q96HJ9 113 aa5.59□□□□□ -1.51
VRK1-206ENST00000557222 A0A087WWL8 130 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 FAM74A7A6NL05 159 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 SH2D1AO60880 128 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 CXCL1P09341 107 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 MALP21145 153 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 FHITP49789 147 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 RPL19P84098 196 aaKnown RBP5.58□□□□□ -1.52
VRK1-206ENST00000557222 ODF1Q14990 250 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 PRR27Q6MZM9 219 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 Q6ZRU5 148 aa5.58□□□□□ -1.52
VRK1-206ENST00000557222 BORCS7-ASMTA0A0B4J1R7 106 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 A0A0D9SG52 128 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 GRIFINA4D1Z8 144 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 USP17L23D6RBM5 183 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 M0R036 132 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 M0R381 172 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 LTAP01374 205 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 UBE2G1P62253 170 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 ZNF726P1Q15940 193 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 C15orf54Q8N8G6 183 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 INO80EQ8NBZ0 244 aaPredicted RBP5.57□□□□□ -1.52
VRK1-206ENST00000557222 DAZAP1Q96EP5 407 aaKnown RBP5.57□□□□□ -1.52
VRK1-206ENST00000557222 PRR34Q9NV39 138 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 VAX2Q9UIW0 290 aa5.57□□□□□ -1.52
VRK1-206ENST00000557222 ANGP03950 147 aaKnown RBP5.56□□□□□ -1.52
VRK1-206ENST00000557222 S100A9P06702 114 aaKnown RBP5.56□□□□□ -1.52
VRK1-206ENST00000557222 PRSS1P07477 247 aa5.56□□□□□ -1.52
VRK1-206ENST00000557222 UBE2G2P60604 165 aa5.56□□□□□ -1.52
VRK1-206ENST00000557222 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
VRK1-206ENST00000557222 MPV17L2Q567V2 206 aa5.56□□□□□ -1.52
VRK1-206ENST00000557222 SDIM1Q6ZPB5 146 aa5.56□□□□□ -1.52
VRK1-206ENST00000557222 NEXN-AS1Q8NBZ9 246 aa5.56□□□□□ -1.52
VRK1-206ENST00000557222 RNF185Q96GF1 192 aa5.56□□□□□ -1.52
VRK1-206ENST00000557222 LRP2P98164 4655 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 SNAI2O43623 268 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 PTTG1O95997 202 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 CNBPP62633 177 aaKnown RBP5.55□□□□□ -1.52
VRK1-206ENST00000557222 AKR1C8PQ5T2L2 129 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 RPL7L1Q6DKI1 246 aaKnown RBP5.55□□□□□ -1.52
VRK1-206ENST00000557222 KRTAP26-1Q6PEX3 210 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 CHCHD5Q9BSY4 110 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 ZNF471Q9BX82 626 aaPredicted RBP5.55□□□□□ -1.52
VRK1-206ENST00000557222 ALG5Q9Y673 324 aa5.55□□□□□ -1.52
VRK1-206ENST00000557222 TRAV8-4A0A0B4J246 113 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 P01737 135 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 HLA-DQA1P01909 254 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 GIPP09681 153 aaPredicted RBP5.54□□□□□ -1.52
VRK1-206ENST00000557222 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 GZMBP10144 247 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 HNRNPA3P51991 378 aaKnown RBP5.54□□□□□ -1.52
VRK1-206ENST00000557222 ZNF56Q15929 161 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 STOML3Q8TAV4 291 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 MED28Q9H204 178 aa5.54□□□□□ -1.52
VRK1-206ENST00000557222 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 TMSB15BA0A087X1C1 80 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 MAP1LC3B2A6NCE7 125 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 F5H697 171 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 AKR1C3P42330 323 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 RBX1P62877 108 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 IQCJQ1A5X6 159 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 NTM-AS1Q6ZSK4 140 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 MAP1LC3BQ9GZQ8 125 aa5.53□□□□□ -1.52
VRK1-206ENST00000557222 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.52□□□□□ -1.53
VRK1-206ENST00000557222 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 TRIAP1O43715 76 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 SMIM17P0DL12 118 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 Q5BKY6 102 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 SPANXN1Q5VSR9 72 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 CST9LP1Q5W188 147 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 LINC00269Q8N2A0 174 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 OR10AG1Q8NH19 301 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms