RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 MGPP08493 103 aa8.02□□□□□ -1.13
SYNE2-226ENST00000557084 UBE2D3P61077 147 aa8.02□□□□□ -1.13
SYNE2-226ENST00000557084 UBE2D2P62837 147 aa8.02□□□□□ -1.13
SYNE2-226ENST00000557084 CDPF1Q6NVV7 123 aa8.02□□□□□ -1.13
SYNE2-226ENST00000557084 EIF5A2Q9GZV4 153 aaKnown RBP8.02□□□□□ -1.13
SYNE2-226ENST00000557084 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
SYNE2-226ENST00000557084 TMEM250H0YL14 139 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 H7C1H1 209 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 DAZ4Q86SG3 579 aaKnown RBP8.01□□□□□ -1.13
SYNE2-226ENST00000557084 Q8N3U1 123 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 NEXN-AS1Q8NBZ9 246 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 NUDT10Q8NFP7 164 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 OR10G8Q8NGN5 311 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 NUDT11Q96G61 164 aa8.01□□□□□ -1.13
SYNE2-226ENST00000557084 DAZ3Q9NR90 486 aaKnown RBP8.01□□□□□ -1.13
SYNE2-226ENST00000557084 TRGC1P0CF51 173 aa8□□□□□ -1.13
SYNE2-226ENST00000557084 FUSP35637 526 aaKnown RBP eCLIP8□□□□□ -1.13
SYNE2-226ENST00000557084 ELOBQ15370 118 aa8□□□□□ -1.13
SYNE2-226ENST00000557084 LYZL1Q6UWQ5 148 aa8□□□□□ -1.13
SYNE2-226ENST00000557084 OCC1Q8TAD7 63 aa8□□□□□ -1.13
SYNE2-226ENST00000557084 RMI2Q96E14 147 aa8□□□□□ -1.13
SYNE2-226ENST00000557084 RPP21Q9H633 154 aaKnown RBP8□□□□□ -1.13
SYNE2-226ENST00000557084 TRBV6-8A0A0A6YYG3 113 aa7.99□□□□□ -1.13
SYNE2-226ENST00000557084 TWIST1Q15672 202 aa7.99□□□□□ -1.13
SYNE2-226ENST00000557084 TMEM97Q5BJF2 176 aa7.99□□□□□ -1.13
SYNE2-226ENST00000557084 NIT1Q86X76 327 aa7.99□□□□□ -1.13
SYNE2-226ENST00000557084 CHCHD5Q9BSY4 110 aa7.99□□□□□ -1.13
SYNE2-226ENST00000557084 RNASE7Q9H1E1 156 aaKnown RBP7.99□□□□□ -1.13
SYNE2-226ENST00000557084 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
SYNE2-226ENST00000557084 K7EN84 100 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 NTF3P20783 257 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 PKIAP61925 76 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 SMIM15Q7Z3B0 74 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 MAPKAPK5-AS1Q8N8E1 139 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 LYPD6BQ8NI32 183 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 KLK12Q9UKR0 248 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 KIF25-AS1Q9Y6Z4 181 aa7.98□□□□□ -1.13
SYNE2-226ENST00000557084 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 IGKV2D-24A0A075B6R9 120 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 IGLV5-52A0A0A0MRZ9 124 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 GATCO43716 136 aaKnown RBP7.97□□□□□ -1.13
SYNE2-226ENST00000557084 SUMO4Q6EEV6 95 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 WDR73Q6P4I2 378 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 NTN5Q8WTR8 489 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-226ENST00000557084 UBE2WQ96B02 151 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 DNAJC30Q96LL9 226 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
SYNE2-226ENST00000557084 A8MWL6 223 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 M0QY20 66 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 CRPP02741 224 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 GCSHP23434 173 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 CTRLP40313 264 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 RASL11AQ6T310 242 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 HSPG2P98160 4391 aa7.96□□□□□ -1.14
SYNE2-226ENST00000557084 TRBV25-1A0A075B6N4 114 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 LRCOL1A6NCL2 159 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 ZNF727A8MUV8 499 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 ANGP03950 147 aaKnown RBP7.95□□□□□ -1.14
SYNE2-226ENST00000557084 Q0VG73 95 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 Q8N814 137 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 C15orf54Q8N8G6 183 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 BORCS7Q96B45 105 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 FAM210AQ96ND0 272 aa7.95□□□□□ -1.14
SYNE2-226ENST00000557084 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
SYNE2-226ENST00000557084 IGHV1-24A0A0C4DH33 117 aa7.94□□□□□ -1.14
SYNE2-226ENST00000557084 LECT2O14960 151 aa7.94□□□□□ -1.14
SYNE2-226ENST00000557084 TEX261Q6UWH6 196 aa7.94□□□□□ -1.14
SYNE2-226ENST00000557084 FAM231DQ6ZW35 169 aa7.94□□□□□ -1.14
SYNE2-226ENST00000557084 PGLYRP4Q96LB8 373 aa7.94□□□□□ -1.14
SYNE2-226ENST00000557084 NIT2Q9NQR4 276 aa7.94□□□□□ -1.14
SYNE2-226ENST00000557084 NDUFS6O75380 124 aaKnown RBP7.93□□□□□ -1.14
SYNE2-226ENST00000557084 GAGE6Q13070 117 aa7.93□□□□□ -1.14
SYNE2-226ENST00000557084 MPV17L2Q567V2 206 aa7.93□□□□□ -1.14
SYNE2-226ENST00000557084 BAALCQ8WXS3 180 aa7.93□□□□□ -1.14
SYNE2-226ENST00000557084 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
SYNE2-226ENST00000557084 CNFNQ9BYD5 112 aa7.93□□□□□ -1.14
SYNE2-226ENST00000557084 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
SYNE2-226ENST00000557084 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
SYNE2-226ENST00000557084 CT83Q5H943 113 aa7.92□□□□□ -1.14
SYNE2-226ENST00000557084 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
SYNE2-226ENST00000557084 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
SYNE2-226ENST00000557084 Q8N976 141 aa7.92□□□□□ -1.14
SYNE2-226ENST00000557084 GTSF1Q8WW33 167 aa7.92□□□□□ -1.14
SYNE2-226ENST00000557084 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 UBE2L6O14933 153 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 SRP19P09132 144 aaKnown RBP7.91□□□□□ -1.14
SYNE2-226ENST00000557084 COTL1Q14019 142 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 PEA15Q15121 130 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 IQCJQ1A5X6 159 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 TMEM241Q24JQ0 296 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 ATRAIDQ6UW56 229 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 Q8N1X5 172 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 FRZBQ92765 325 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 TMEM243Q9BU79 118 aa7.91□□□□□ -1.14
SYNE2-226ENST00000557084 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-226ENST00000557084 TRAV26-2A0A0B4J265 109 aa7.9□□□□□ -1.14
SYNE2-226ENST00000557084 RBX1P62877 108 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms