RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 GATCO43716 136 aaKnown RBP6.95□□□□□ -1.3
SNX6-208ENST00000556712 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
SNX6-208ENST00000556712 TEX261Q6UWH6 196 aa6.95□□□□□ -1.3
SNX6-208ENST00000556712 NIT1Q86X76 327 aa6.95□□□□□ -1.3
SNX6-208ENST00000556712 GTSF1Q8WW33 167 aa6.95□□□□□ -1.3
SNX6-208ENST00000556712 F2Z2F3 143 aa6.94□□□□□ -1.3
SNX6-208ENST00000556712 PSCAO43653 123 aa6.94□□□□□ -1.3
SNX6-208ENST00000556712 NTF3P20783 257 aa6.94□□□□□ -1.3
SNX6-208ENST00000556712 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
SNX6-208ENST00000556712 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
SNX6-208ENST00000556712 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
SNX6-208ENST00000556712 ZNF727A8MUV8 499 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 C9JQL5 133 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 M0QY20 66 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 LAGE3Q14657 143 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 TWIST1Q15672 202 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 URGCP-MRPS24S4R325 110 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 HSPG2P98160 4391 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 RYR1P21817 5038 aa6.93□□□□□ -1.3
SNX6-208ENST00000556712 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 TRAV26-2A0A0B4J265 109 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 LRCOL1A6NCL2 159 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 EREGO14944 169 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
SNX6-208ENST00000556712 WFDC2Q14508 124 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 MPV17L2Q567V2 206 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 PGLYRP4Q96LB8 373 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 CNFNQ9BYD5 112 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 KLK12Q9UKR0 248 aa6.92□□□□□ -1.3
SNX6-208ENST00000556712 APOBP04114 4563 aaKnown RBP6.92□□□□□ -1.3
SNX6-208ENST00000556712 A0A087WX48 190 aa6.91□□□□□ -1.3
SNX6-208ENST00000556712 H7C1H1 209 aa6.91□□□□□ -1.3
SNX6-208ENST00000556712 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
SNX6-208ENST00000556712 NTM-AS1Q6ZSK4 140 aa6.91□□□□□ -1.3
SNX6-208ENST00000556712 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
SNX6-208ENST00000556712 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
SNX6-208ENST00000556712 TMEM262E9PQX1 116 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 LECT2O14960 151 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
SNX6-208ENST00000556712 GAGE6Q13070 117 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 ADIRFQ15847 76 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 CT83Q5H943 113 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 WDR73Q6P4I2 378 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 RASL11AQ6T310 242 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 UBE2WQ96B02 151 aa6.9□□□□□ -1.3
SNX6-208ENST00000556712 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 A8MWL6 223 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 KCNIP4Q6PIL6 250 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 Q8N814 137 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 MAPKAPK5-AS1Q8N8E1 139 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 C15orf54Q8N8G6 183 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 Q8N976 141 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.89□□□□□ -1.31
SNX6-208ENST00000556712 GATD1Q8NB37 220 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 TSKUQ8WUA8 353 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
SNX6-208ENST00000556712 CHCHD7Q9BUK0 85 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 OSTCQ9NRP0 149 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 V9GYV3 84 aa6.89□□□□□ -1.31
SNX6-208ENST00000556712 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 HIGD1CA8MV81 97 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 ANGP03950 147 aaKnown RBP6.88□□□□□ -1.31
SNX6-208ENST00000556712 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 PEA15Q15121 130 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 CDPF1Q6NVV7 123 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 NIT2Q9NQR4 276 aa6.88□□□□□ -1.31
SNX6-208ENST00000556712 IGLV5-52A0A0A0MRZ9 124 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 IGHV1-24A0A0C4DH33 117 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 GAS8-AS1O95177 125 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 ELOBQ15370 118 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 IQCJQ1A5X6 159 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 FAM74A3Q4VXF1 159 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 TMEM97Q5BJF2 176 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 SMIM15Q7Z3B0 74 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 BAALCQ8WXS3 180 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 BORCS7Q96B45 105 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
SNX6-208ENST00000556712 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
SNX6-208ENST00000556712 A0A1B0GUT8 65 aa6.86□□□□□ -1.31
SNX6-208ENST00000556712 CRPP02741 224 aa6.86□□□□□ -1.31
SNX6-208ENST00000556712 RBX1P62877 108 aa6.86□□□□□ -1.31
SNX6-208ENST00000556712 RMI2Q96E14 147 aa6.86□□□□□ -1.31
SNX6-208ENST00000556712 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
SNX6-208ENST00000556712 GFRA4Q9GZZ7 299 aa6.86□□□□□ -1.31
SNX6-208ENST00000556712 AMTP48728 403 aa6.85□□□□□ -1.31
SNX6-208ENST00000556712 HAMPP81172 84 aa6.85□□□□□ -1.31
SNX6-208ENST00000556712 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms