RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 Q8N3U1 123 aa7.75□□□□□ -1.17
SLIRP-206ENST00000556375 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 H7C1H1 209 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 GATCO43716 136 aaKnown RBP7.74□□□□□ -1.17
SLIRP-206ENST00000556375 NTF3P20783 257 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 KRTAP10-2P60368 255 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 NIT1Q86X76 327 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-206ENST00000556375 CHCHD7Q9BUK0 85 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 DPH3P1Q9H4G8 78 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 Q9HAA7 133 aa7.74□□□□□ -1.17
SLIRP-206ENST00000556375 A0A087WTM6 91 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 TRBV6-8A0A0A6YYG3 113 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 A8MWL6 223 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 M0QY20 66 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
SLIRP-206ENST00000556375 GTSF1Q8WW33 167 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
SLIRP-206ENST00000556375 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
SLIRP-206ENST00000556375 APOBP04114 4563 aaKnown RBP7.73□□□□□ -1.17
SLIRP-206ENST00000556375 PSCAO43653 123 aa7.72□□□□□ -1.17
SLIRP-206ENST00000556375 TWIST1Q15672 202 aa7.72□□□□□ -1.17
SLIRP-206ENST00000556375 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
SLIRP-206ENST00000556375 TMEM97Q5BJF2 176 aa7.72□□□□□ -1.17
SLIRP-206ENST00000556375 CDPF1Q6NVV7 123 aa7.72□□□□□ -1.17
SLIRP-206ENST00000556375 HSPG2P98160 4391 aa7.72□□□□□ -1.17
SLIRP-206ENST00000556375 A0A087WX48 190 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 TRAV8-3A0A0A6YYJ7 113 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 KCNIP4Q6PIL6 250 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 RASL11AQ6T310 242 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 TM2D2Q9BX73 214 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 OSTCQ9NRP0 149 aa7.71□□□□□ -1.18
SLIRP-206ENST00000556375 C9JQL5 133 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-206ENST00000556375 PKIAP61925 76 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 PEA15Q15121 130 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 ELOBQ15370 118 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 SMIM15Q7Z3B0 74 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 TSKUQ8WUA8 353 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 GFRA4Q9GZZ7 299 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 PGPEP1Q9NXJ5 209 aa7.7□□□□□ -1.18
SLIRP-206ENST00000556375 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 FAM231BA6NCW3 169 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 CDK2AP2O75956 126 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 SRSF3P84103 164 aaKnown RBP7.69□□□□□ -1.18
SLIRP-206ENST00000556375 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 NTM-AS1Q6ZSK4 140 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 C15orf54Q8N8G6 183 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 FRZBQ92765 325 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 ISOC2Q96AB3 205 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 CHCHD5Q9BSY4 110 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 NIT2Q9NQR4 276 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 NAT8Q9UHE5 227 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 KLK12Q9UKR0 248 aa7.69□□□□□ -1.18
SLIRP-206ENST00000556375 TRBV25-1A0A075B6N4 114 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 HIGD1CA8MV81 97 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 RPL23P62829 140 aaKnown RBP7.68□□□□□ -1.18
SLIRP-206ENST00000556375 ADIRFQ15847 76 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 IQCJQ1A5X6 159 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 MPV17L2Q567V2 206 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 RMI2Q96E14 147 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 COX11Q9Y6N1 276 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 V9GYV3 84 aa7.68□□□□□ -1.18
SLIRP-206ENST00000556375 IGHV1-24A0A0C4DH33 117 aa7.67□□□□□ -1.18
SLIRP-206ENST00000556375 A0A1B0GUT8 65 aa7.67□□□□□ -1.18
SLIRP-206ENST00000556375 TMEM262E9PQX1 116 aa7.67□□□□□ -1.18
SLIRP-206ENST00000556375 GATD1Q8NB37 220 aa7.67□□□□□ -1.18
SLIRP-206ENST00000556375 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
SLIRP-206ENST00000556375 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
SLIRP-206ENST00000556375 FUSP35637 526 aaKnown RBP eCLIP7.66□□□□□ -1.18
SLIRP-206ENST00000556375 Q0VG73 95 aa7.66□□□□□ -1.18
SLIRP-206ENST00000556375 ATRAIDQ6UW56 229 aa7.66□□□□□ -1.18
SLIRP-206ENST00000556375 Q8N814 137 aa7.66□□□□□ -1.18
SLIRP-206ENST00000556375 NTN5Q8WTR8 489 aaPredicted RBP7.66□□□□□ -1.18
SLIRP-206ENST00000556375 IGKV2D-24A0A075B6R9 120 aa7.65□□□□□ -1.18
SLIRP-206ENST00000556375 CRPP02741 224 aa7.65□□□□□ -1.18
SLIRP-206ENST00000556375 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.18
SLIRP-206ENST00000556375 RAB14P61106 215 aa7.65□□□□□ -1.18
SLIRP-206ENST00000556375 GAGE6Q13070 117 aa7.65□□□□□ -1.18
SLIRP-206ENST00000556375 Q8N976 141 aa7.65□□□□□ -1.18
SLIRP-206ENST00000556375 RBX1P62877 108 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 RIGQ13278 110 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 COTL1Q14019 142 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 WFDC2Q14508 124 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 NUP35Q8NFH5 326 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 RPL39LQ96EH5 51 aaKnown RBP7.64□□□□□ -1.19
SLIRP-206ENST00000556375 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 C1orf43Q9BWL3 253 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 TMEM191AQ9H0A3 160 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 NAT8BQ9UHF3 227 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
SLIRP-206ENST00000556375 IGLV5-52A0A0A0MRZ9 124 aa7.63□□□□□ -1.19
SLIRP-206ENST00000556375 AMTP48728 403 aa7.63□□□□□ -1.19
SLIRP-206ENST00000556375 MIAQ16674 131 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms