RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
ACTN1-217ENST00000556203 M0QY20 66 aa10.23□□□□□ -0.77
ACTN1-217ENST00000556203 TMEM241Q24JQ0 296 aa10.23□□□□□ -0.77
ACTN1-217ENST00000556203 PGLYRP4Q96LB8 373 aa10.23□□□□□ -0.77
ACTN1-217ENST00000556203 DNAH11Q96DT5 4516 aa10.23□□□□□ -0.77
ACTN1-217ENST00000556203 DYNC1H1Q14204 4646 aaKnown RBP10.23□□□□□ -0.77
ACTN1-217ENST00000556203 H7C1H1 209 aa10.22□□□□□ -0.77
ACTN1-217ENST00000556203 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
ACTN1-217ENST00000556203 C15orf54Q8N8G6 183 aa10.22□□□□□ -0.77
ACTN1-217ENST00000556203 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-217ENST00000556203 SMDT1Q9H4I9 107 aa10.22□□□□□ -0.77
ACTN1-217ENST00000556203 Q9HAA7 133 aa10.22□□□□□ -0.77
ACTN1-217ENST00000556203 OSTCQ9NRP0 149 aa10.22□□□□□ -0.77
ACTN1-217ENST00000556203 C16orf90A8MZG2 172 aa10.21□□□□□ -0.77
ACTN1-217ENST00000556203 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.77
ACTN1-217ENST00000556203 DAZ4Q86SG3 579 aaKnown RBP10.21□□□□□ -0.77
ACTN1-217ENST00000556203 NIT1Q86X76 327 aa10.21□□□□□ -0.77
ACTN1-217ENST00000556203 TSKUQ8WUA8 353 aa10.21□□□□□ -0.77
ACTN1-217ENST00000556203 ISOC2Q96AB3 205 aa10.21□□□□□ -0.77
ACTN1-217ENST00000556203 DAZ3Q9NR90 486 aaKnown RBP10.21□□□□□ -0.77
ACTN1-217ENST00000556203 NAT8Q9UHE5 227 aa10.21□□□□□ -0.77
ACTN1-217ENST00000556203 URGCP-MRPS24S4R325 110 aa10.21□□□□□ -0.77
ACTN1-217ENST00000556203 PKD1P98161 4303 aa10.21□□□□□ -0.78
ACTN1-217ENST00000556203 PKHD1P08F94 4074 aa10.2□□□□□ -0.78
ACTN1-217ENST00000556203 TRBV6-8A0A0A6YYG3 113 aa10.2□□□□□ -0.78
ACTN1-217ENST00000556203 FOXA3P55318 350 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-217ENST00000556203 RAB14P61106 215 aa10.2□□□□□ -0.78
ACTN1-217ENST00000556203 ADIRFQ15847 76 aa10.2□□□□□ -0.78
ACTN1-217ENST00000556203 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
ACTN1-217ENST00000556203 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
ACTN1-217ENST00000556203 HIGD1CA8MV81 97 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 KRTAP10-2P60368 255 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 LAGE3Q14657 143 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 BORCS7Q96B45 105 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 GFRA4Q9GZZ7 299 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 V9GYV3 84 aa10.19□□□□□ -0.78
ACTN1-217ENST00000556203 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 A0A087WTM6 91 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 A0A087WX48 190 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 EREGO14944 169 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 PSCAO43653 123 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 TMEM97Q5BJF2 176 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 KCNIP4Q6PIL6 250 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
ACTN1-217ENST00000556203 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
ACTN1-217ENST00000556203 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
ACTN1-217ENST00000556203 TMEM262E9PQX1 116 aa10.17□□□□□ -0.78
ACTN1-217ENST00000556203 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
ACTN1-217ENST00000556203 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
ACTN1-217ENST00000556203 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
ACTN1-217ENST00000556203 TRAV8-3A0A0A6YYJ7 113 aa10.16□□□□□ -0.78
ACTN1-217ENST00000556203 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
ACTN1-217ENST00000556203 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
ACTN1-217ENST00000556203 KLK12Q9UKR0 248 aa10.16□□□□□ -0.78
ACTN1-217ENST00000556203 TRBV25-1A0A075B6N4 114 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 FUSP35637 526 aaKnown RBP eCLIP10.14□□□□□ -0.79
ACTN1-217ENST00000556203 ELOBQ15370 118 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 IQCJQ1A5X6 159 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 FRZBQ92765 325 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 NAT8BQ9UHF3 227 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 HERC2O95714 4834 aa10.14□□□□□ -0.79
ACTN1-217ENST00000556203 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 PKIAP61925 76 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 GAGE6Q13070 117 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 RIGQ13278 110 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 CLLU1Q5K131 121 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
ACTN1-217ENST00000556203 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
ACTN1-217ENST00000556203 IFITM2Q01629 132 aa10.12□□□□□ -0.79
ACTN1-217ENST00000556203 ATRAIDQ6UW56 229 aa10.12□□□□□ -0.79
ACTN1-217ENST00000556203 Q8N976 141 aa10.12□□□□□ -0.79
ACTN1-217ENST00000556203 TMEM191AQ9H0A3 160 aa10.12□□□□□ -0.79
ACTN1-217ENST00000556203 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
ACTN1-217ENST00000556203 SMIM27A0A1W2PRY6 76 aa10.11□□□□□ -0.79
ACTN1-217ENST00000556203 ANGP03950 147 aaKnown RBP10.11□□□□□ -0.79
ACTN1-217ENST00000556203 RMI2Q96E14 147 aa10.11□□□□□ -0.79
ACTN1-217ENST00000556203 TMEM243Q9BU79 118 aa10.11□□□□□ -0.79
ACTN1-217ENST00000556203 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
ACTN1-217ENST00000556203 IGKV2D-24A0A075B6R9 120 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 RBX1P62877 108 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 Q0VG73 95 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 COTL1Q14019 142 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 CDPF1Q6NVV7 123 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 AMN1Q8IY45 258 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 RNF185Q96GF1 192 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 COX11Q9Y6N1 276 aa10.1□□□□□ -0.79
ACTN1-217ENST00000556203 RYR1P21817 5038 aa10.09□□□□□ -0.79
ACTN1-217ENST00000556203 GAS8-AS1O95177 125 aa10.09□□□□□ -0.79
ACTN1-217ENST00000556203 CRPP02741 224 aa10.09□□□□□ -0.79
ACTN1-217ENST00000556203 RAB4AP20338 218 aa10.09□□□□□ -0.79
ACTN1-217ENST00000556203 ENHOQ6UWT2 76 aa10.09□□□□□ -0.79
ACTN1-217ENST00000556203 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
ACTN1-217ENST00000556203 AMTP48728 403 aa10.08□□□□□ -0.8
ACTN1-217ENST00000556203 WFDC2Q14508 124 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms