RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 HSD52Q0P140 79 aa1.34□□□□□ -2.2
KTN1-223ENST00000555573 C5orf56Q8N8D9 126 aa1.34□□□□□ -2.2
KTN1-223ENST00000555573 ARFGEF1Q9Y6D6 1849 aa1.34□□□□□ -2.2
KTN1-223ENST00000555573 CPSF1Q10570 1443 aaKnown RBP1.34□□□□□ -2.2
KTN1-223ENST00000555573 SPTBP11277 2137 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 DOCK2Q92608 1830 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 DOCK1Q14185 1865 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 CCL19Q99731 98 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 SPHKAPQ2M3C7 1700 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 AKAP12Q02952 1782 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 NCOA6Q14686 2063 aaPredicted RBP1.33□□□□□ -2.2
KTN1-223ENST00000555573 TECTAO75443 2155 aa1.33□□□□□ -2.2
KTN1-223ENST00000555573 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 FAM24AA6NFZ4 105 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 EFNA4P52798 201 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 VPS8Q8N3P4 1428 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 CASKIN1Q8WXD9 1431 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 SHROOM2Q13796 1616 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 TNS1Q9HBL0 1735 aaKnown RBP1.32□□□□□ -2.2
KTN1-223ENST00000555573 TCHHQ07283 1943 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
KTN1-223ENST00000555573 S100A8P05109 93 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 SPINK8P0C7L1 97 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 UBE2D1P51668 147 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 CAV3P56539 151 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 C5orf38Q86SI9 138 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 C20orf197Q8N268 126 aa1.32□□□□□ -2.2
KTN1-223ENST00000555573 ABCA4P78363 2273 aa1.31□□□□□ -2.2
KTN1-223ENST00000555573 ASCC3Q8N3C0 2202 aaKnown RBP1.31□□□□□ -2.2
KTN1-223ENST00000555573 TRAV30A0A087WSZ9 112 aa1.31□□□□□ -2.2
KTN1-223ENST00000555573 HCG22E2RYF7 251 aa1.31□□□□□ -2.2
KTN1-223ENST00000555573 CCL8P80075 99 aa1.31□□□□□ -2.2
KTN1-223ENST00000555573 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
KTN1-223ENST00000555573 ABCA3Q99758 1704 aa1.31□□□□□ -2.2
KTN1-223ENST00000555573 TRBV30A0A0K0K1B3 111 aa1.3□□□□□ -2.2
KTN1-223ENST00000555573 ZNF56Q15929 161 aa1.3□□□□□ -2.2
KTN1-223ENST00000555573 ZNF818PQ6ZRF7 136 aa1.3□□□□□ -2.2
KTN1-223ENST00000555573 C4orf33Q8N1A6 199 aa1.3□□□□□ -2.2
KTN1-223ENST00000555573 PPP1R1CQ8WVI7 109 aa1.3□□□□□ -2.2
KTN1-223ENST00000555573 UBE2L5PA0A1B0GUS4 154 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 A0A1W2PPM0 123 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 CCL3L1P16619 93 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
KTN1-223ENST00000555573 S100A10P60903 97 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 UBE2L3P68036 154 aaKnown RBP1.29□□□□□ -2.2
KTN1-223ENST00000555573 ACBD7Q8N6N7 88 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 AQP10Q96PS8 301 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 BET1LQ9NYM9 111 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 LOC285556D6RIA3 1793 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 SSBP1Q04837 148 aaKnown RBP1.29□□□□□ -2.2
KTN1-223ENST00000555573 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 COMMD6Q7Z4G1 85 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 COX7B2Q8TF08 81 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 LINC00312Q9Y6C7 94 aa1.29□□□□□ -2.2
KTN1-223ENST00000555573 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
KTN1-223ENST00000555573 FBN3Q75N90 2809 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 TET3O43151 1660 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
KTN1-223ENST00000555573 ARHGAP5Q13017 1502 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 CLPSL1A2RUU4 121 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 SSSCA1O60232 199 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 SIX6O95475 246 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 KLKP1Q107X0 134 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 NCMAPQ5T1S8 102 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 TTC9CQ8N5M4 171 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 TOPAZ1Q8N9V7 1692 aa1.28□□□□□ -2.2
KTN1-223ENST00000555573 C10orf71Q711Q0 1435 aa1.28□□□□□ -2.21
KTN1-223ENST00000555573 KMT2BQ9UMN6 2715 aaPredicted RBP1.28□□□□□ -2.21
KTN1-223ENST00000555573 LRRC37A3O60309 1634 aa1.28□□□□□ -2.21
KTN1-223ENST00000555573 MED12Q93074 2177 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 ANKRD26Q9UPS8 1709 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.27□□□□□ -2.21
KTN1-223ENST00000555573 TRBV7-1A0A0A6YYK4 115 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 RBAKDNA6NC62 111 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 M0R143 59 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 DPH3P1Q9H4G8 78 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 PPIP5K1Q6PFW1 1433 aa1.27□□□□□ -2.21
KTN1-223ENST00000555573 SIPA1L3O60292 1781 aaPredicted RBP1.27□□□□□ -2.21
KTN1-223ENST00000555573 MAP2P11137 1827 aaKnown RBP1.27□□□□□ -2.21
KTN1-223ENST00000555573 ELOF1P60002 83 aaKnown RBP1.26□□□□□ -2.21
KTN1-223ENST00000555573 DCDP81605 110 aaKnown RBP1.26□□□□□ -2.21
KTN1-223ENST00000555573 C10orf128Q5T292 105 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 LINC00474Q9P2X8 69 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 SCAPERQ9BY12 1400 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 PRDM2Q13029 1718 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 TMEM262E9PQX1 116 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 SNCAP37840 140 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 MYOZ3Q8TDC0 251 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 TMEM14BQ9NUH8 114 aa1.26□□□□□ -2.21
KTN1-223ENST00000555573 PSME4Q14997 1843 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 ABCC10Q5T3U5 1492 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 TANC1Q9C0D5 1861 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 CHD1O14646 1710 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 EDDM3BP56851 147 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 C10orf99Q6UWK7 81 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 CYP4F30PQ9H0H9 118 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 V9GYV3 84 aa1.25□□□□□ -2.21
KTN1-223ENST00000555573 COL6A6A6NMZ7 2263 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms