RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SMAD5-AS1Q9Y6J3 95 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 Q9H8V8 135 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 PVRIGQ6DKI7 326 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 LOXP28300 417 aaPredicted RBP2.58□□□□□ -2
SYNE2-212ENST00000554584 PLAC8L1A1L4L8 177 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 NDUFA12Q9UI09 145 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 TRAV1-1A0A0B4J248 108 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 ZNF73O43830 326 aaPredicted RBP2.58□□□□□ -2
SYNE2-212ENST00000554584 BRI3O95415 125 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 ZNF497Q6ZNH5 498 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 LINC00337Q8N6G1 96 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 CCDC140Q96MF4 163 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 MPZP25189 248 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 FAM222AQ5U5X8 452 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 TRBV24-1A0A075B6N3 115 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 COX7A2LO14548 114 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 DEFB113Q30KQ7 82 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 SERP2Q8N6R1 65 aa2.58□□□□□ -2
SYNE2-212ENST00000554584 SHISA2Q6UWI4 295 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 J3QL48 77 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 C9orf139Q6ZV77 190 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 CEND1Q8N111 149 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 A0A1W2PPM0 123 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 G3V4G9 280 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 NDUFA1O15239 70 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 CRYGDP07320 174 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 SDHAF1A6NFY7 115 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 INAFM2P0DMQ5 153 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 LINC01559Q495D7 138 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 LOC100131303A0A0U1RQF7 123 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 LINC01590Q5TEZ4 76 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 TRPT1Q86TN4 253 aaKnown RBP2.57□□□□□ -2
SYNE2-212ENST00000554584 CPAMD8Q8IZJ3 1885 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 WISP3O95389 354 aaPredicted RBP2.57□□□□□ -2
SYNE2-212ENST00000554584 ZFP2Q6ZN57 461 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 MRPL51Q4U2R6 128 aaKnown RBP2.57□□□□□ -2
SYNE2-212ENST00000554584 C2orf66Q6UXQ4 117 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 LINC00312Q9Y6C7 94 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 NUPR2A6NF83 97 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 UBL5Q9BZL1 73 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 Q9UF83 564 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 THSD7AQ9UPZ6 1657 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 IL18BPO95998 194 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 MGAM2Q2M2H8 2515 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 ATRQ13535 2644 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 Q6ZWC4 215 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 SPANXDQ9BXN6 97 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 IGHV7-81A0A0B4J1V7 117 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 CRYGBP07316 175 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 C12orf74Q32Q52 190 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 COX6B2Q6YFQ2 88 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 C1orf158Q8N1D5 194 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 TMEM14BQ9NUH8 114 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 ZNF503-AS2A6NEH8 195 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 YPEL1O60688 119 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 YPEL2Q96QA6 119 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 LINC00473A8K010 186 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 K7ERS5 55 aa2.57□□□□□ -2
SYNE2-212ENST00000554584 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 SBSPONQ8IVN8 264 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 BUB1B-PAK6H3BSN5 160 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 I3L3M4 83 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 PROK1P58294 105 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 SND1-IT1Q9HBX3 110 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 PRO1854Q9UHT4 67 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 K7EMT4 169 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 LTAP01374 205 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 TDRG1Q3Y452 100 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 COX7BP24311 80 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 PSMB8P28062 276 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 MRPS18CQ9Y3D5 142 aaKnown RBP2.56□□□□□ -2
SYNE2-212ENST00000554584 TMEM30BQ3MIR4 351 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 PTH2Q96A98 100 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 TREML4Q6UXN2 200 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 ORMDL1Q9P0S3 153 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 LYPD1Q8N2G4 141 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 TRBV10-2A0A0K0K1G8 114 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 NPYP01303 97 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 LINC01551Q86U37 167 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 MSRB1Q9NZV6 116 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 SH2D6Q7Z4S9 175 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 TRGV9Q99603 122 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 IGHV2-70DA0A0C4DH43 119 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 IGLC2P0DOY2 106 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 IGLC3P0DOY3 106 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 NMSQ5H8A3 153 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 TMEM61Q8N0U2 210 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 PIP4P1Q86T03 277 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 DKK2Q9UBU2 259 aa2.56□□□□□ -2
SYNE2-212ENST00000554584 TRBV6-7A0A0A0MS04 114 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 TMEM141Q96I45 108 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 A8MZ25 164 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 IGHV2-5P01817 119 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 PATE2Q6UY27 113 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 CRIPAKQ8N1N5 446 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 ZNF492Q9P255 531 aa2.55□□□□□ -2
SYNE2-212ENST00000554584 GCN1Q92616 2671 aaKnown RBP2.55□□□□□ -2
SYNE2-212ENST00000554584 PRAC2D3DTV9 90 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 381 ms