RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 RASL10AQ92737 203 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 AP1S3Q96PC3 154 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 OVOL2Q9BRP0 275 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 DPH3P1Q9H4G8 78 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 A0A1B0GV72 72 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 H7C1H1 209 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 RHODO00212 210 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 TRGC2P03986 189 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 NHLRC4P0CG21 123 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-202ENST00000553619 SPART-AS1P0CW21 52 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 RBMY1A1P0DJD3 496 aaKnown RBP3.6□□□□□ -1.83
VTI1B-202ENST00000553619 RBMY1CP0DJD4 496 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 CKS2P33552 79 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 SLAQ13239 276 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 RBMY1FQ15415 496 aaKnown RBP3.6□□□□□ -1.83
VTI1B-202ENST00000553619 DEFB135Q30KP9 77 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 C11orf72Q8NBR9 251 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 OR4C5Q8NGB2 326 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 OR10AG1Q8NH19 301 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 RNASE8Q8TDE3 154 aaKnown RBP3.6□□□□□ -1.83
VTI1B-202ENST00000553619 MRAP2Q96G30 205 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
VTI1B-202ENST00000553619 LAMTOR2Q9Y2Q5 125 aa3.6□□□□□ -1.83
VTI1B-202ENST00000553619 MUC4Q99102 2169 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 TRGV1A0A0A0MS02 117 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 MUC21A0A0G2JKD1 596 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 MUC21A0A140T8X8 626 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 K7EIL1 84 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 PHOX2AO14813 284 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 RS1O15537 224 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 NXPH4O95158 308 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 EVI2AP22794 236 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 RBX1P62877 108 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 OR10J3Q5JRS4 329 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 ZFP2Q6ZN57 461 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 ORMDL3Q8N138 153 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 C14orf178Q8N769 122 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-202ENST00000553619 MRAPQ8TCY5 172 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 MSRB1Q9NZV6 116 aa3.59□□□□□ -1.83
VTI1B-202ENST00000553619 NIPBLQ6KC79 2804 aaeCLIP3.58□□□□□ -1.84
VTI1B-202ENST00000553619 TRGV2A0A075B6R0 118 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 A0A087WWL8 130 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 C20orf202A1L168 122 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 CRYGDP07320 174 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 MGPP08493 103 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 EMP1P54849 157 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 DAD1P61803 113 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 ZNF56Q15929 161 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 MRPL51Q4U2R6 128 aaKnown RBP3.58□□□□□ -1.84
VTI1B-202ENST00000553619 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 POM121L12Q8N7R1 296 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 DNAJC30Q96LL9 226 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 PRELID3AQ96N28 172 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 C18orf15Q96N68 181 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 COL6A5A8TX70 2615 aa3.58□□□□□ -1.84
VTI1B-202ENST00000553619 TRGV4A0A0C4DH28 118 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 IGHV4-28A0A0C4DH34 117 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 K7EMI3 77 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 K7ERU9 68 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 GAGE7O76087 117 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 PRB2P02812 416 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-202ENST00000553619 PRM2P04554 102 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 GAGE12FP0CL80 117 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 GAGE12GP0CL81 117 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 GAGE12IP0CL82 117 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 DEFB130BP0DP73 79 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 DEFB130AP0DP74 79 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 SRIP30626 198 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 NDUFA6P56556 154 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 Q0VG73 95 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 FAM74A4Q5TZK3 123 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 FAM222AQ5U5X8 452 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 CFAP126Q5VTH2 177 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 BAGE3Q86Y29 109 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 SBSPONQ8IVN8 264 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 RNF185Q96GF1 192 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 B9D2Q9BPU9 175 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 C20orf78Q9BR46 151 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 VPS25Q9BRG1 176 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 TM2D3Q9BRN9 247 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 PRADC1Q9BSG0 188 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 ALKBH7Q9BT30 221 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-202ENST00000553619 C11orf68Q9H3H3 251 aaKnown RBP3.57□□□□□ -1.84
VTI1B-202ENST00000553619 MAP1LC3AQ9H492 121 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 EDA2RQ9HAV5 297 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 NXT2Q9NPJ8 142 aaKnown RBP3.57□□□□□ -1.84
VTI1B-202ENST00000553619 SPANXA1Q9NS26 97 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 MRPL16Q9NX20 251 aaKnown RBP3.57□□□□□ -1.84
VTI1B-202ENST00000553619 KIF25-AS1Q9Y6Z4 181 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 U3KQK5 164 aa3.57□□□□□ -1.84
VTI1B-202ENST00000553619 NACAE9PAV3 2078 aa3.56□□□□□ -1.84
VTI1B-202ENST00000553619 TRBV10-1A0A0K0K1A3 114 aa3.56□□□□□ -1.84
VTI1B-202ENST00000553619 TRBV6-4A0A1B0GX49 114 aa3.56□□□□□ -1.84
VTI1B-202ENST00000553619 PLAC8L1A1L4L8 177 aa3.56□□□□□ -1.84
VTI1B-202ENST00000553619 D6R8Y8 96 aa3.56□□□□□ -1.84
VTI1B-202ENST00000553619 VCYO14598 125 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms