RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 LMO4P61968 165 aa8.78□□□□□ -1
SYNE2-208ENST00000553289 FOXI1Q12951 378 aa8.78□□□□□ -1
SYNE2-208ENST00000553289 PDE6GP18545 87 aa8.78□□□□□ -1
SYNE2-208ENST00000553289 SPAG11BQ08648 103 aa8.77□□□□□ -1
SYNE2-208ENST00000553289 SMIM20Q8N5G0 67 aa8.77□□□□□ -1
SYNE2-208ENST00000553289 TTTY13Q9BZ97 58 aa8.77□□□□□ -1
SYNE2-208ENST00000553289 MAP6D1Q9H9H5 199 aa8.77□□□□□ -1
SYNE2-208ENST00000553289 OBSL1O75147 1896 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 NDUFB1O75438 58 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 CHD3Q12873 2000 aaKnown RBP8.77□□□□□ -1.01
SYNE2-208ENST00000553289 TMEM131Q92545 1883 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 WFDC2Q14508 124 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 MRAPQ8TCY5 172 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 C2orf16Q68DN1 1984 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 FRMD6-AS1P0C7T7 363 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 DIRC1Q969H9 104 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 MED13LQ71F56 2210 aa8.77□□□□□ -1.01
SYNE2-208ENST00000553289 TRBV12-3P01733 135 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 NREPQ16612 68 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 CRIP3Q6Q6R5 217 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 Q6ZPA2 131 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 TMEM256-PLSCR3K7ERE1 68 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 NDUFS5O43920 106 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 EBI3Q14213 229 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 MIAQ16674 131 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
SYNE2-208ENST00000553289 CRYGBP07316 175 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 ZNF80P51504 273 aaPredicted RBP8.75□□□□□ -1.01
SYNE2-208ENST00000553289 MIR7-3HGQ8N6C7 128 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 LECT2O14960 151 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 IGHV4-4A0A075B6R2 117 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 PSMB8P28062 276 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 DAND5Q8N907 189 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 MBD6Q96DN6 1003 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 CITED2Q99967 270 aaPredicted RBP8.75□□□□□ -1.01
SYNE2-208ENST00000553289 RS1O15537 224 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 NDUFA11Q86Y39 141 aa8.75□□□□□ -1.01
SYNE2-208ENST00000553289 B5MCH6 92 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 F8W735 103 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-208ENST00000553289 H7C423 109 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 MP68P56378 58 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 NRGNQ92686 78 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 NACAE9PAV3 2078 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 DEFB135Q30KP9 77 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 PRB1P04280 392 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 DEFB1P60022 68 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 WISP2O76076 250 aa8.74□□□□□ -1.01
SYNE2-208ENST00000553289 LINC00322Q6ZN03 302 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-208ENST00000553289 K7EQG2 157 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 NCR3O14931 201 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 A0A1B0GX51 115 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 SMIM9A6NGZ8 99 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 DNAJC9-AS1A6NH13 148 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 Q6ZUT4 128 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 KIAA1549LQ6ZVL6 1849 aa8.73□□□□□ -1.01
SYNE2-208ENST00000553289 FAM236AA0A1B0GUQ0 79 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 FAM236BA0A1B0GV22 79 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 DYSFO75923 2080 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 Q6YL49 198 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 KLK12Q9UKR0 248 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 G3V4G9 280 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 LY6LH3BQJ8 138 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
SYNE2-208ENST00000553289 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.01
SYNE2-208ENST00000553289 RNASE8Q8TDE3 154 aaKnown RBP8.71□□□□□ -1.01
SYNE2-208ENST00000553289 CLEC2BQ92478 149 aa8.71□□□□□ -1.01
SYNE2-208ENST00000553289 HIGD2BQ4VC39 106 aa8.71□□□□□ -1.01
SYNE2-208ENST00000553289 NEXN-AS1Q8NBZ9 246 aa8.71□□□□□ -1.01
SYNE2-208ENST00000553289 PRORYQ9H606 182 aa8.71□□□□□ -1.01
SYNE2-208ENST00000553289 ESM1Q9NQ30 184 aa8.71□□□□□ -1.01
SYNE2-208ENST00000553289 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
SYNE2-208ENST00000553289 UFSP1Q6NVU6 142 aa8.71□□□□□ -1.02
SYNE2-208ENST00000553289 NCOA6Q14686 2063 aaPredicted RBP8.71□□□□□ -1.02
SYNE2-208ENST00000553289 LYRM9A8MSI8 78 aa8.71□□□□□ -1.02
SYNE2-208ENST00000553289 UBE2AP49459 152 aa8.71□□□□□ -1.02
SYNE2-208ENST00000553289 HIST2H2BDQ6DRA6 164 aa8.7□□□□□ -1.02
SYNE2-208ENST00000553289 ZFAND2AQ8N6M9 145 aa8.7□□□□□ -1.02
SYNE2-208ENST00000553289 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-208ENST00000553289 ADAMTS9Q9P2N4 1935 aa8.7□□□□□ -1.02
SYNE2-208ENST00000553289 LINC00643Q86TS7 51 aa8.7□□□□□ -1.02
SYNE2-208ENST00000553289 C1orf229Q6ZS94 237 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-208ENST00000553289 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
SYNE2-208ENST00000553289 COX7BP24311 80 aa8.69□□□□□ -1.02
SYNE2-208ENST00000553289 SPANXB1Q9NS25 103 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-208ENST00000553289 U3KQK5 164 aa8.69□□□□□ -1.02
SYNE2-208ENST00000553289 LINC01548A6NM66 108 aa8.69□□□□□ -1.02
SYNE2-208ENST00000553289 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
SYNE2-208ENST00000553289 TECTAO75443 2155 aa8.69□□□□□ -1.02
SYNE2-208ENST00000553289 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
SYNE2-208ENST00000553289 FREM1Q5H8C1 2179 aa8.68□□□□□ -1.02
SYNE2-208ENST00000553289 IGHV4-28A0A0C4DH34 117 aa8.68□□□□□ -1.02
SYNE2-208ENST00000553289 SS18L2Q9UHA2 77 aa8.68□□□□□ -1.02
SYNE2-208ENST00000553289 IL17DQ8TAD2 202 aa8.67□□□□□ -1.02
SYNE2-208ENST00000553289 TCL1BO95988 128 aa8.67□□□□□ -1.02
SYNE2-208ENST00000553289 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
SYNE2-208ENST00000553289 Q6ZTI0 123 aa8.67□□□□□ -1.02
SYNE2-208ENST00000553289 TP53TG3Q9ULZ0 132 aa8.67□□□□□ -1.02
SYNE2-208ENST00000553289 TTC28Q96AY4 2481 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms