RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TSHBP01222 138 aa9.29□□□□□ -0.92
HDAC7-230ENST00000552960 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
HDAC7-230ENST00000552960 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
HDAC7-230ENST00000552960 COX6B1P14854 86 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 PMVKQ15126 192 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 FAM159AQ6UWV7 190 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 TEN1Q86WV5 123 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
HDAC7-230ENST00000552960 TRAV12-3A0A0B4J271 114 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 PF4V1P10720 104 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 GPHB5Q86YW7 130 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 PIMREGQ9BSJ6 248 aa9.28□□□□□ -0.92
HDAC7-230ENST00000552960 SDHAF1A6NFY7 115 aa9.27□□□□□ -0.92
HDAC7-230ENST00000552960 UBE2E1P51965 193 aa9.27□□□□□ -0.92
HDAC7-230ENST00000552960 HIVEP2P31629 2446 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 IGLV4-69A0A075B6H9 119 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 LINC01619G3V211 115 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 OVOL1O14753 267 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 CRIP2P52943 208 aaPredicted RBP9.27□□□□□ -0.93
HDAC7-230ENST00000552960 ZNF56Q15929 161 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 PRO1854Q9UHT4 67 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 ERG28Q9UKR5 140 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 ITPR3Q14573 2671 aa9.27□□□□□ -0.93
HDAC7-230ENST00000552960 A4D1N5 150 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 J3QQQ9 107 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 UBE2D3P61077 147 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 UBE2D2P62837 147 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 FLNAP21333 2647 aaKnown RBP9.26□□□□□ -0.93
HDAC7-230ENST00000552960 NPFFO15130 113 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 HTN1P15515 57 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 U3KQE9 123 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
HDAC7-230ENST00000552960 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 PRSS2P07478 247 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 HIST2H2BDQ6DRA6 164 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 C5orf56Q8N8D9 126 aa9.26□□□□□ -0.93
HDAC7-230ENST00000552960 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 EDN2P20800 178 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 GAGE5Q13069 117 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 GAGE6Q13070 117 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 ATP6V0E2Q8NHE4 81 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 RHPN1-AS1Q9BWJ2 59 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 VCYO14598 125 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 SLC25A20O43772 301 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 PPP1R17O96001 155 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
HDAC7-230ENST00000552960 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 NPC2P61916 151 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 GAGE2BQ13066 116 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 PDZD2O15018 2839 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
HDAC7-230ENST00000552960 SNCGO76070 127 aa9.23□□□□□ -0.93
HDAC7-230ENST00000552960 ZNF580Q9UK33 172 aa9.23□□□□□ -0.93
HDAC7-230ENST00000552960 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
HDAC7-230ENST00000552960 TRAV4A0A0B4J268 109 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 H3BUX3 64 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 TMEM95Q3KNT9 176 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 UNC79Q9P2D8 2635 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 CRLF1O75462 422 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 NTN5Q8WTR8 489 aaPredicted RBP9.22□□□□□ -0.93
HDAC7-230ENST00000552960 SPXQ9BT56 116 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 KLK9Q9UKQ9 250 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 MOB4Q9Y3A3 225 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 MSMBP08118 114 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
HDAC7-230ENST00000552960 BLCAPP62952 87 aa9.22□□□□□ -0.93
HDAC7-230ENST00000552960 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
HDAC7-230ENST00000552960 IGHV1-69DA0A0B4J2H0 117 aa9.21□□□□□ -0.93
HDAC7-230ENST00000552960 A0A0J9YXV3 536 aa9.21□□□□□ -0.93
HDAC7-230ENST00000552960 CCDC179H3BU77 68 aa9.21□□□□□ -0.93
HDAC7-230ENST00000552960 IGHV1-69P01742 117 aa9.21□□□□□ -0.93
HDAC7-230ENST00000552960 LINC00315P59091 139 aa9.21□□□□□ -0.93
HDAC7-230ENST00000552960 MDFICQ9P1T7 246 aa9.21□□□□□ -0.94
HDAC7-230ENST00000552960 FAM223BA6NKX1 122 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 NDUFA4O00483 81 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 FAM223AQ8IWN6 122 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 TMEM141Q96I45 108 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 SOCS3O14543 225 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 ELANEP08246 267 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 KIF25-AS1Q9Y6Z4 181 aa9.2□□□□□ -0.94
HDAC7-230ENST00000552960 HERV-K104P63124 156 aa9.19□□□□□ -0.94
HDAC7-230ENST00000552960 KHDC1LQ5JSQ8 128 aa9.19□□□□□ -0.94
HDAC7-230ENST00000552960 A0A096LNT2 108 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms