RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 GAGE7O76087 117 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 GAGE12FP0CL80 117 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 GAGE12GP0CL81 117 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 GAGE12IP0CL82 117 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 GAGE4Q13068 117 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 TIMM17AQ99595 171 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 WNK1Q9H4A3 2382 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 LEPROTO15243 131 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 EDN2P20800 178 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 HIVEP3Q5T1R4 2406 aa8.69□□□□□ -1.02
PPFIA2-227ENST00000552948 USP9YO00507 2555 aaPredicted RBP8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 MYO9AB2RTY4 2548 aa8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 ITLN2Q8WWU7 325 aaPredicted RBP8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 CLEC2BQ92478 149 aa8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 IGHV3-38A0A0C4DH36 116 aa8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 POLR2KP53803 58 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 DUX3Q96PT4 197 aa8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
PPFIA2-227ENST00000552948 PTPN13Q12923 2485 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 IGHV3OR16-12A0A075B7B8 117 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 A8MZ25 164 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 I3L3M4 83 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 RHODO00212 210 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 P0DMU3 169 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 FAM231AP0DMU4 169 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 FAM231CP0DMU5 169 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 U3KQE9 123 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 USMG5Q96IX5 58 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
PPFIA2-227ENST00000552948 CRLF1O75462 422 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 ADORA2A-AS1P86434 159 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 NDUFV3P56181 108 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 MEIG1Q5JSS6 88 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 Q6ZSV7 163 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 SVIPQ8NHG7 77 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 IGHV1OR15-1A0A075B7D0 117 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 IGHV3-30-3P0DP02 117 aa8.66□□□□□ -1.02
PPFIA2-227ENST00000552948 K7ENP7 123 aa8.65□□□□□ -1.02
PPFIA2-227ENST00000552948 TRIAP1O43715 76 aa8.65□□□□□ -1.02
PPFIA2-227ENST00000552948 IGHV3-16A0A0C4DH30 117 aa8.65□□□□□ -1.02
PPFIA2-227ENST00000552948 A0A0J9YXY3 114 aa8.65□□□□□ -1.02
PPFIA2-227ENST00000552948 SYNJ2BPP57105 145 aa8.65□□□□□ -1.02
PPFIA2-227ENST00000552948 CCDC179H3BU77 68 aa8.65□□□□□ -1.03
PPFIA2-227ENST00000552948 IGHV1-69P01742 117 aa8.65□□□□□ -1.03
PPFIA2-227ENST00000552948 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.03
PPFIA2-227ENST00000552948 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 ELANEP08246 267 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 IGHV4-38-2P0DP08 117 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 ACACBO00763 2458 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 SETD2Q9BYW2 2564 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 A0A087WW49 117 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 ICOSQ9Y6W8 199 aa8.64□□□□□ -1.03
PPFIA2-227ENST00000552948 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 KLRB1Q12918 225 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 ZNF292O60281 2723 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 PRM2P04554 102 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 PROK1P58294 105 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 LMO4P61968 165 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 SPENQ96T58 3664 aaKnown RBP8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 PRRC2AP48634 2157 aaKnown RBP8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 MUC4Q99102 2169 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 A0A1W2PPR1 153 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 M0QY20 66 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 RHOHQ15669 191 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 CACNA1AO00555 2505 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 USP9XQ93008 2570 aaPredicted RBP8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 IGLV4-3A0A075B6K6 122 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
PPFIA2-227ENST00000552948 RELNP78509 3460 aa8.62□□□□□ -1.03
PPFIA2-227ENST00000552948 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
PPFIA2-227ENST00000552948 ATP5J2P56134 94 aa8.62□□□□□ -1.03
PPFIA2-227ENST00000552948 LINC00315P59091 139 aa8.62□□□□□ -1.03
PPFIA2-227ENST00000552948 LY6DQ14210 128 aa8.62□□□□□ -1.03
PPFIA2-227ENST00000552948 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
PPFIA2-227ENST00000552948 TLN2Q9Y4G6 2542 aa8.61□□□□□ -1.03
PPFIA2-227ENST00000552948 TRGV11A0A075B6L2 103 aa8.61□□□□□ -1.03
PPFIA2-227ENST00000552948 LINC01587Q99440 93 aa8.61□□□□□ -1.03
PPFIA2-227ENST00000552948 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
PPFIA2-227ENST00000552948 FBXL19-AS1Q494R0 122 aa8.6□□□□□ -1.03
PPFIA2-227ENST00000552948 PIMREGQ9BSJ6 248 aa8.6□□□□□ -1.03
PPFIA2-227ENST00000552948 SPTBN4Q9H254 2564 aa8.6□□□□□ -1.03
PPFIA2-227ENST00000552948 DEFB131AP59861 70 aa8.6□□□□□ -1.03
PPFIA2-227ENST00000552948 YAE1D1Q9NRH1 226 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms