RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NFE4Q86UQ8 179 aa12.55□□□□□ -0.4
PRPF40B-216ENST00000552301 TSKUQ8WUA8 353 aa12.55□□□□□ -0.4
PRPF40B-216ENST00000552301 IGHV3-30P01768 117 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 IGHV3-30-3P0DP02 117 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 IGHV3-30-5P0DP03 117 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 TNP2Q05952 138 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 SUMO4Q6EEV6 95 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 TNFRSF18Q9Y5U5 241 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 DNAH2Q9P225 4427 aa12.54□□□□□ -0.4
PRPF40B-216ENST00000552301 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
PRPF40B-216ENST00000552301 URGCP-MRPS24S4R325 110 aa12.53□□□□□ -0.4
PRPF40B-216ENST00000552301 HERC2O95714 4834 aa12.53□□□□□ -0.4
PRPF40B-216ENST00000552301 A0A1B0GVY2 172 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 FAM231BA6NCW3 169 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 M0QY20 66 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 CLLU1Q5K131 121 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 KCNIP4Q6PIL6 250 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 V9GYV3 84 aa12.52□□□□□ -0.41
PRPF40B-216ENST00000552301 DNAH17Q9UFH2 4485 aa12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 A0A1B0GUT8 65 aa12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 TMEM97Q5BJF2 176 aa12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-216ENST00000552301 HECTD4Q9Y4D8 3996 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 A0A087WX48 190 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 IBA57-AS1B1ANH7 110 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 RIGQ13278 110 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 Q9HAA7 133 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 NIT2Q9NQR4 276 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
PRPF40B-216ENST00000552301 IFITM2Q01629 132 aa12.47□□□□□ -0.41
PRPF40B-216ENST00000552301 LAGE3Q14657 143 aa12.47□□□□□ -0.41
PRPF40B-216ENST00000552301 Q6ZRN7 208 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-216ENST00000552301 NIT1Q86X76 327 aa12.47□□□□□ -0.41
PRPF40B-216ENST00000552301 FAT2Q9NYQ8 4349 aa12.47□□□□□ -0.41
PRPF40B-216ENST00000552301 TMEM262E9PQX1 116 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 EREGO14944 169 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 PSCAO43653 123 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 PKIAP61925 76 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 Q8N3U1 123 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 FRZBQ92765 325 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 CHCHD5Q9BSY4 110 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 CHCHD7Q9BUK0 85 aa12.46□□□□□ -0.41
PRPF40B-216ENST00000552301 TRBV25-1A0A075B6N4 114 aa12.45□□□□□ -0.42
PRPF40B-216ENST00000552301 TRAV26-2A0A0B4J265 109 aa12.45□□□□□ -0.42
PRPF40B-216ENST00000552301 ELOBQ15370 118 aa12.45□□□□□ -0.42
PRPF40B-216ENST00000552301 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-216ENST00000552301 GATD1Q8NB37 220 aa12.44□□□□□ -0.42
PRPF40B-216ENST00000552301 TMEM191AQ9H0A3 160 aa12.44□□□□□ -0.42
PRPF40B-216ENST00000552301 TRAV8-3A0A0A6YYJ7 113 aa12.43□□□□□ -0.42
PRPF40B-216ENST00000552301 IGHV1-24A0A0C4DH33 117 aa12.43□□□□□ -0.42
PRPF40B-216ENST00000552301 SMIM27A0A1W2PRY6 76 aa12.43□□□□□ -0.42
PRPF40B-216ENST00000552301 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
PRPF40B-216ENST00000552301 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
PRPF40B-216ENST00000552301 KLK12Q9UKR0 248 aa12.42□□□□□ -0.42
PRPF40B-216ENST00000552301 COTL1Q14019 142 aa12.41□□□□□ -0.42
PRPF40B-216ENST00000552301 IQCJQ1A5X6 159 aa12.41□□□□□ -0.42
PRPF40B-216ENST00000552301 UQCC3Q6UW78 93 aa12.41□□□□□ -0.42
PRPF40B-216ENST00000552301 NTM-AS1Q6ZSK4 140 aa12.41□□□□□ -0.42
PRPF40B-216ENST00000552301 RMI2Q96E14 147 aa12.41□□□□□ -0.42
PRPF40B-216ENST00000552301 RPL39LQ96EH5 51 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-216ENST00000552301 C16orf90A8MZG2 172 aa12.4□□□□□ -0.42
PRPF40B-216ENST00000552301 GAGE6Q13070 117 aa12.4□□□□□ -0.42
PRPF40B-216ENST00000552301 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.42
PRPF40B-216ENST00000552301 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
PRPF40B-216ENST00000552301 A0A1B0GW15 77 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 CRPP02741 224 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 S100A8P05109 93 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 MPV17L2Q567V2 206 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 AMN1Q8IY45 258 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 UBE2WQ96B02 151 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 MRAP2Q96G30 205 aa12.39□□□□□ -0.43
PRPF40B-216ENST00000552301 A0A087WTM6 91 aa12.38□□□□□ -0.43
PRPF40B-216ENST00000552301 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
PRPF40B-216ENST00000552301 ANGP03950 147 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-216ENST00000552301 AMTP48728 403 aa12.38□□□□□ -0.43
PRPF40B-216ENST00000552301 CAMPP49913 170 aa12.38□□□□□ -0.43
PRPF40B-216ENST00000552301 COX11Q9Y6N1 276 aa12.38□□□□□ -0.43
PRPF40B-216ENST00000552301 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 UBE2L6O14933 153 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 RAB4AP20338 218 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 MRPL54Q6P161 138 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 ATRAIDQ6UW56 229 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 COMMD7Q86VX2 200 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 ANAPC16Q96DE5 110 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 KIAA1109Q2LD37 5005 aa12.37□□□□□ -0.43
PRPF40B-216ENST00000552301 F8W036 122 aa12.36□□□□□ -0.43
PRPF40B-216ENST00000552301 HBBP68871 147 aa12.36□□□□□ -0.43
PRPF40B-216ENST00000552301 Q0VG73 95 aa12.36□□□□□ -0.43
PRPF40B-216ENST00000552301 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
PRPF40B-216ENST00000552301 IGKV2D-24A0A075B6R9 120 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms