RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TRAV8-6A0A0B4J262 113 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 K7EP13 123 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
CDK4-208ENST00000551706 LELP1Q5T871 98 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 OR10G8Q8NGN5 311 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 BORCS7Q96B45 105 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 Q9UF83 564 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 A0A087WWC5 75 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 H7C1H1 209 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 EVI2AP22794 236 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 LINC00315P59091 139 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
CDK4-208ENST00000551706 MGPP08493 103 aa11.82□□□□□ -0.52
CDK4-208ENST00000551706 DNAH10OSP0CZ25 163 aa11.82□□□□□ -0.52
CDK4-208ENST00000551706 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
CDK4-208ENST00000551706 WFDC10BQ8IUB3 73 aa11.82□□□□□ -0.52
CDK4-208ENST00000551706 PGLYRP4Q96LB8 373 aa11.82□□□□□ -0.52
CDK4-208ENST00000551706 V9GYV3 84 aa11.82□□□□□ -0.52
CDK4-208ENST00000551706 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
CDK4-208ENST00000551706 RTL8CO15255 209 aa11.81□□□□□ -0.52
CDK4-208ENST00000551706 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
CDK4-208ENST00000551706 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.81□□□□□ -0.52
CDK4-208ENST00000551706 IGHV3-38A0A0C4DH36 116 aa11.8□□□□□ -0.52
CDK4-208ENST00000551706 UBE2D3P61077 147 aa11.8□□□□□ -0.52
CDK4-208ENST00000551706 UBE2D2P62837 147 aa11.8□□□□□ -0.52
CDK4-208ENST00000551706 NEXN-AS1Q8NBZ9 246 aa11.8□□□□□ -0.52
CDK4-208ENST00000551706 KRTAP1-5Q9BYS1 174 aa11.8□□□□□ -0.52
CDK4-208ENST00000551706 A0A1B0GUT8 65 aa11.79□□□□□ -0.52
CDK4-208ENST00000551706 M0QY20 66 aa11.79□□□□□ -0.52
CDK4-208ENST00000551706 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
CDK4-208ENST00000551706 DNAJC30Q96LL9 226 aa11.79□□□□□ -0.52
CDK4-208ENST00000551706 TMEM218A2RU14 115 aa11.78□□□□□ -0.52
CDK4-208ENST00000551706 S100A1P23297 94 aa11.78□□□□□ -0.52
CDK4-208ENST00000551706 PNRC1Q12796 327 aaPredicted RBP11.78□□□□□ -0.52
CDK4-208ENST00000551706 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
CDK4-208ENST00000551706 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
CDK4-208ENST00000551706 NAT8BQ9UHF3 227 aa11.78□□□□□ -0.52
CDK4-208ENST00000551706 RASL11AQ6T310 242 aa11.77□□□□□ -0.53
CDK4-208ENST00000551706 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.53
CDK4-208ENST00000551706 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.53
CDK4-208ENST00000551706 TNFRSF18Q9Y5U5 241 aa11.77□□□□□ -0.53
CDK4-208ENST00000551706 F8W036 122 aa11.76□□□□□ -0.53
CDK4-208ENST00000551706 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
CDK4-208ENST00000551706 NUP35Q8NFH5 326 aa11.76□□□□□ -0.53
CDK4-208ENST00000551706 FRZBQ92765 325 aa11.76□□□□□ -0.53
CDK4-208ENST00000551706 SMIM27A0A1W2PRY6 76 aa11.75□□□□□ -0.53
CDK4-208ENST00000551706 RIGQ13278 110 aa11.75□□□□□ -0.53
CDK4-208ENST00000551706 NFE4Q86UQ8 179 aa11.75□□□□□ -0.53
CDK4-208ENST00000551706 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
CDK4-208ENST00000551706 SEC11CQ9BY50 192 aa11.75□□□□□ -0.53
CDK4-208ENST00000551706 NIT2Q9NQR4 276 aa11.75□□□□□ -0.53
CDK4-208ENST00000551706 PPP1R2P9O14990 202 aa11.74□□□□□ -0.53
CDK4-208ENST00000551706 TRBV6-8A0A0A6YYG3 113 aa11.73□□□□□ -0.53
CDK4-208ENST00000551706 TMEM191AQ9H0A3 160 aa11.73□□□□□ -0.53
CDK4-208ENST00000551706 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
CDK4-208ENST00000551706 A0A1B0GW15 77 aa11.71□□□□□ -0.53
CDK4-208ENST00000551706 IBA57-AS1B1ANH7 110 aa11.71□□□□□ -0.53
CDK4-208ENST00000551706 PKIAP61925 76 aa11.71□□□□□ -0.53
CDK4-208ENST00000551706 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
CDK4-208ENST00000551706 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
CDK4-208ENST00000551706 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
CDK4-208ENST00000551706 CARHSP1Q9Y2V2 147 aaKnown RBP11.71□□□□□ -0.53
CDK4-208ENST00000551706 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 IGHV3-30P01768 117 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 MT-ND4LP03901 98 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 IGHV3-30-5P0DP03 117 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 ADCYAP1P18509 176 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 NIT1Q86X76 327 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 ANAPC16Q96DE5 110 aa11.7□□□□□ -0.54
CDK4-208ENST00000551706 A0A087WX48 190 aa11.69□□□□□ -0.54
CDK4-208ENST00000551706 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
CDK4-208ENST00000551706 APOC3P02656 99 aa11.69□□□□□ -0.54
CDK4-208ENST00000551706 LAGE3Q14657 143 aa11.69□□□□□ -0.54
CDK4-208ENST00000551706 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
CDK4-208ENST00000551706 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
CDK4-208ENST00000551706 S100A8P05109 93 aa11.68□□□□□ -0.54
CDK4-208ENST00000551706 TNP2Q05952 138 aa11.68□□□□□ -0.54
CDK4-208ENST00000551706 ELOBQ15370 118 aa11.68□□□□□ -0.54
CDK4-208ENST00000551706 Q6ZRN7 208 aaPredicted RBP11.68□□□□□ -0.54
CDK4-208ENST00000551706 SVBPQ8N300 66 aa11.68□□□□□ -0.54
CDK4-208ENST00000551706 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
CDK4-208ENST00000551706 IGHV1-24A0A0C4DH33 117 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 TMEM262E9PQX1 116 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 SNAPINO95295 136 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 RAB4AP20338 218 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 IQCJQ1A5X6 159 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
CDK4-208ENST00000551706 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
CDK4-208ENST00000551706 Q8N1X5 172 aa11.66□□□□□ -0.54
CDK4-208ENST00000551706 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
CDK4-208ENST00000551706 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
CDK4-208ENST00000551706 DMBT1Q9UGM3 2413 aaPredicted RBP11.65□□□□□ -0.54
CDK4-208ENST00000551706 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
CDK4-208ENST00000551706 TRBV6-5A0A0K0K1A5 114 aa11.65□□□□□ -0.54
CDK4-208ENST00000551706 CAMPP49913 170 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms