RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 MED9Q9NWA0 146 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 AKAP9Q99996 3911 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 NEBP20929 6669 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 TRAV17A0A0B4J275 112 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 PRORSD1PA6NEY8 169 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 MRPS14O60783 128 aaKnown RBP2.19□□□□□ -2.06
CUX2-203ENST00000551604 CXCL1P09341 107 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 MPC1LP0DKB6 136 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 NDUFA6P56556 154 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 HBBP68871 147 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 C10orf55Q5SWW7 151 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 PLPP5Q8NEB5 264 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 ZNF563Q8TA94 476 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 THEM6Q8WUY1 208 aa2.19□□□□□ -2.06
CUX2-203ENST00000551604 MAGOHBQ96A72 148 aaKnown RBP2.19□□□□□ -2.06
CUX2-203ENST00000551604 RMND5BQ96G75 393 aaPredicted RBP2.19□□□□□ -2.06
CUX2-203ENST00000551604 HEATR1Q9H583 2144 aaKnown RBP2.19□□□□□ -2.06
CUX2-203ENST00000551604 A0A0G2JMM0 328 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 TRDV1A0A1B0GX56 115 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 A0A1W2PPB8 328 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 A0A1W2PRS3 328 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 KIR3DP1A8MWS1 328 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 UQCRHP07919 91 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 NBEAP1P0C6P0 100 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 MSMO1Q15800 293 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 PHF5AQ7RTV0 110 aaKnown RBP2.18□□□□□ -2.06
CUX2-203ENST00000551604 PROK2Q9HC23 129 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 SOX21Q9Y651 276 aaPredicted RBP2.18□□□□□ -2.06
CUX2-203ENST00000551604 CADP27708 2225 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 USF3Q68DE3 2245 aa2.18□□□□□ -2.06
CUX2-203ENST00000551604 HRNRQ86YZ3 2850 aaPredicted RBP2.18□□□□□ -2.06
CUX2-203ENST00000551604 ODAMA1E959 279 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 RER1O15258 196 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 HYPMO75409 117 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 PRB4P10163 310 aaPredicted RBP2.17□□□□□ -2.06
CUX2-203ENST00000551604 COX6B1P14854 86 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 RAB5CP51148 216 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 SARNPP82979 210 aaKnown RBP2.17□□□□□ -2.06
CUX2-203ENST00000551604 KLRD1Q13241 179 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 C2orf82Q6UX34 121 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 C4orf22Q6V702 233 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 Q8IYB0 196 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 RETNLBQ9BQ08 111 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 RASL12Q9NYN1 266 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 NAT8BQ9UHF3 227 aa2.17□□□□□ -2.06
CUX2-203ENST00000551604 S100A11P31949 105 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 TFF3Q07654 80 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 SURF2Q15527 256 aaPredicted RBP2.16□□□□□ -2.06
CUX2-203ENST00000551604 PATE2Q6UY27 113 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 OR5D14Q8NGL3 314 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 CHCHD1Q96BP2 118 aaKnown RBP2.16□□□□□ -2.06
CUX2-203ENST00000551604 SMR3AQ99954 134 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 AIF1LQ9BQI0 150 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 CYSTM1Q9H1C7 97 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 LRTM1Q9HBL6 345 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 BATF3Q9NR55 127 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 ASB4Q9Y574 426 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 ABCA1O95477 2261 aa2.16□□□□□ -2.06
CUX2-203ENST00000551604 CR1P17927 2039 aa2.15□□□□□ -2.06
CUX2-203ENST00000551604 CHD3Q12873 2000 aaKnown RBP2.15□□□□□ -2.06
CUX2-203ENST00000551604 RNF213Q63HN8 5207 aa2.15□□□□□ -2.06
CUX2-203ENST00000551604 TCRBV4S1A1TA0A5B7 111 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 KPNA4O00629 521 aaPredicted RBP2.15□□□□□ -2.07
CUX2-203ENST00000551604 LYRM1O43325 122 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 PLGLB1Q02325 96 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 RPS27LQ71UM5 84 aaKnown RBP2.15□□□□□ -2.07
CUX2-203ENST00000551604 TP53RKQ96S44 253 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 REG4Q9BYZ8 158 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 OTORQ9NRC9 128 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 RNF11Q9Y3C5 154 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 MED31Q9Y3C7 131 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
CUX2-203ENST00000551604 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
CUX2-203ENST00000551604 GABARAPH6UMI1 98 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 M0R233 179 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 FABP2P12104 132 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 SDC2P34741 201 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 POLR2HP52434 150 aaKnown RBP2.14□□□□□ -2.07
CUX2-203ENST00000551604 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 ROMO1P60602 79 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 GNG11P61952 73 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 CDK5R1Q15078 307 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 C3orf62Q6ZUJ4 267 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 MORN4Q8NDC4 146 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 CARD19Q96LW7 228 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 KLK9Q9UKQ9 250 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 CHCHD2Q9Y6H1 151 aaPredicted RBP2.14□□□□□ -2.07
CUX2-203ENST00000551604 PLCE1Q9P212 2302 aa2.14□□□□□ -2.07
CUX2-203ENST00000551604 ZNF469Q96JG9 3925 aaPredicted RBP2.13□□□□□ -2.07
CUX2-203ENST00000551604 ARFGEF3Q5TH69 2177 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 OR2T8A6NH00 312 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 K7ERJ3 54 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 DSCR4P56555 118 aaPredicted RBP2.13□□□□□ -2.07
CUX2-203ENST00000551604 CDK6Q00534 326 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 DEFB113Q30KQ7 82 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 C1orf137Q5JT78 98 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 SCIMPQ6UWF3 145 aa2.13□□□□□ -2.07
CUX2-203ENST00000551604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms