RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 NAT8Q9UHE5 227 aa4.97□□□□□ -1.61
PTCH1-219ENST00000549678 TNFRSF18Q9Y5U5 241 aa4.97□□□□□ -1.61
PTCH1-219ENST00000549678 A0A087WX48 190 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 TMEM262E9PQX1 116 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 CTRLP40313 264 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 UFSP1Q6NVU6 142 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 FAM231DQ6ZW35 169 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 LINC01551Q86U37 167 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 PGLYRP4Q96LB8 373 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 SMDT1Q9H4I9 107 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 Q9HAA7 133 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.62
PTCH1-219ENST00000549678 UBE2D3P61077 147 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 UBE2D2P62837 147 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 TNP2Q05952 138 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 TMEM97Q5BJF2 176 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 CT83Q5H943 113 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 SUMO4Q6EEV6 95 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 OR10G8Q8NGN5 311 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 DNAJC30Q96LL9 226 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 OSTCQ9NRP0 149 aa4.95□□□□□ -1.62
PTCH1-219ENST00000549678 TRBV25-1A0A075B6N4 114 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 HIGD1CA8MV81 97 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 CDK2AP2O75956 126 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 CRPP02741 224 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 LINC00694P0DN24 101 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 PKIAP61925 76 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 RPL23P62829 140 aaKnown RBP4.94□□□□□ -1.62
PTCH1-219ENST00000549678 RIGQ13278 110 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 ELOBQ15370 118 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 WDR73Q6P4I2 378 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 RASL11AQ6T310 242 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 DAZ4Q86SG3 579 aaKnown RBP4.94□□□□□ -1.62
PTCH1-219ENST00000549678 ZNF575Q86XF7 245 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 GTSF1Q8WW33 167 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 ISOC2Q96AB3 205 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 DAZ3Q9NR90 486 aaKnown RBP4.94□□□□□ -1.62
PTCH1-219ENST00000549678 Q9UF83 564 aa4.94□□□□□ -1.62
PTCH1-219ENST00000549678 A0A1B0GUT8 65 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 UBE2L6O14933 153 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 SRSF3P84103 164 aaKnown RBP4.93□□□□□ -1.62
PTCH1-219ENST00000549678 TSKUQ8WUA8 353 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 RMI2Q96E14 147 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 TM2D2Q9BX73 214 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 GFRA4Q9GZZ7 299 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 NIT2Q9NQR4 276 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 NAT8BQ9UHF3 227 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 KIF25-AS1Q9Y6Z4 181 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
PTCH1-219ENST00000549678 IGKV2D-24A0A075B6R9 120 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 TRBV6-8A0A0A6YYG3 113 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 TRAV8-3A0A0A6YYJ7 113 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 IGHV1-24A0A0C4DH33 117 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 FAM231BA6NCW3 169 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 M0QY20 66 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 CLLU1Q5K131 121 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 SPATA12Q7Z6I5 190 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 CNFNQ9BYD5 112 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 KLK12Q9UKR0 248 aa4.92□□□□□ -1.62
PTCH1-219ENST00000549678 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
PTCH1-219ENST00000549678 TRAV26-2A0A0B4J265 109 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 C9JQL5 133 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 PPP1R2P9O14990 202 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 ANGP03950 147 aaKnown RBP4.91□□□□□ -1.62
PTCH1-219ENST00000549678 AMTP48728 403 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 CAMPP49913 170 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 GAGE6Q13070 117 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 COTL1Q14019 142 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 LAGE3Q14657 143 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 NIT1Q86X76 327 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 Q8N3U1 123 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 NUP35Q8NFH5 326 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 UBE2WQ96B02 151 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 V9GYV3 84 aa4.91□□□□□ -1.62
PTCH1-219ENST00000549678 APCSP02743 223 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 S100A8P05109 93 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 PMCHP20382 165 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-219ENST00000549678 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 FRZBQ92765 325 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM243Q9BU79 118 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 C1orf43Q9BWL3 253 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM191AQ9H0A3 160 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 COX11Q9Y6N1 276 aa4.9□□□□□ -1.63
PTCH1-219ENST00000549678 HERC1Q15751 4861 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 A0A087WTM6 91 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 F8W036 122 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 MT-ND4LP03901 98 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
PTCH1-219ENST00000549678 Q0VG73 95 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 MPV17L2Q567V2 206 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms