RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 LINC00470Q9BZP3 86 aa0.37□□□□□ -2.35
MRPL42-205ENST00000549561 KDM6BO15054 1643 aa0.37□□□□□ -2.35
MRPL42-205ENST00000549561 FRAS1Q86XX4 4008 aa0.37□□□□□ -2.35
MRPL42-205ENST00000549561 BICRAQ9NZM4 1560 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 ZNF518AQ6AHZ1 1483 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 DOCK11Q5JSL3 2073 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 TRGV1A0A0A0MS02 117 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 TRBV10-3A0A0K0K1G6 114 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 TMEM14DPA8MWL7 114 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 FAM25AB3EWG3 89 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 FAM25CB3EWG5 89 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 FAM25GB3EWG6 89 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 APOC4-APOC2K7ER74 178 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 CCL8P80075 99 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 S100A7L2Q5SY68 101 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 SEC11CQ9BY50 192 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 NAV2Q8IVL1 2488 aa0.36□□□□□ -2.35
MRPL42-205ENST00000549561 SMIM6P0DI80 62 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 HIST1H1DP16402 221 aaKnown RBP0.35□□□□□ -2.35
MRPL42-205ENST00000549561 COX6A2Q02221 97 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 INSL4Q14641 139 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 Q6ZRX8 168 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 WFDC6Q9BQY6 131 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 AGPAT4-IT1Q9H0P7 198 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 SPEF2Q9C093 1822 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 IFT140Q96RY7 1462 aa0.35□□□□□ -2.35
MRPL42-205ENST00000549561 CADP27708 2225 aa0.34□□□□□ -2.35
MRPL42-205ENST00000549561 ARFGEF1Q9Y6D6 1849 aa0.34□□□□□ -2.35
MRPL42-205ENST00000549561 MYH9P35579 1960 aaKnown RBP0.34□□□□□ -2.35
MRPL42-205ENST00000549561 CLPSL1A2RUU4 121 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 K7EP13 123 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 GNG7O60262 68 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 NMBP08949 121 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 GCHFRP30047 84 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 C12orf73Q69YU5 71 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 C1orf54Q8WWF1 131 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 SNRNP25Q9BV90 132 aaKnown RBP0.34□□□□□ -2.36
MRPL42-205ENST00000549561 RERGLQ9H628 205 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 LINC00312Q9Y6C7 94 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 CACNA1HO95180 2353 aa0.34□□□□□ -2.36
MRPL42-205ENST00000549561 SSC5DA1L4H1 1573 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 UNC13BO14795 1591 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 NAIPQ13075 1403 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 SIX6O95475 246 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 Q5VV11 94 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 NAA60Q9H7X0 242 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 SERP1Q9Y6X1 66 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 CFTRP13569 1480 aa0.33□□□□□ -2.36
MRPL42-205ENST00000549561 TPRP12270 2363 aaKnown RBP0.32□□□□□ -2.36
MRPL42-205ENST00000549561 LRRC37A3O60309 1634 aa0.32□□□□□ -2.36
MRPL42-205ENST00000549561 BTG2P78543 158 aa0.32□□□□□ -2.36
MRPL42-205ENST00000549561 MEIG1Q5JSS6 88 aa0.32□□□□□ -2.36
MRPL42-205ENST00000549561 TTC28Q96AY4 2481 aa0.32□□□□□ -2.36
MRPL42-205ENST00000549561 NWD2Q9ULI1 1742 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 TRAV1-2A0A0B4J238 106 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 HCG22E2RYF7 251 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 Q6AWC8 147 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 BAGE3Q86Y29 109 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 AQP10Q96PS8 301 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 SIPA1L3O60292 1781 aaPredicted RBP0.31□□□□□ -2.36
MRPL42-205ENST00000549561 ABCA12Q86UK0 2595 aa0.31□□□□□ -2.36
MRPL42-205ENST00000549561 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
MRPL42-205ENST00000549561 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
MRPL42-205ENST00000549561 TRAV13-2A0A0B4J235 113 aa0.3□□□□□ -2.36
MRPL42-205ENST00000549561 SPAARA0A1B0GVQ0 90 aa0.3□□□□□ -2.36
MRPL42-205ENST00000549561 FGF7P21781 194 aa0.3□□□□□ -2.36
MRPL42-205ENST00000549561 SARNPP82979 210 aaKnown RBP0.3□□□□□ -2.36
MRPL42-205ENST00000549561 RBM3P98179 157 aaKnown RBP0.3□□□□□ -2.36
MRPL42-205ENST00000549561 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.3□□□□□ -2.36
MRPL42-205ENST00000549561 MYH7P12883 1935 aa0.3□□□□□ -2.36
MRPL42-205ENST00000549561 PXDNQ92626 1479 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 EFCAB10A6NFE3 127 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 PIN1P1O15428 100 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 Q56UQ5 140 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 Q5BKY6 102 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 UBE2DNLQ8IWF7 75 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 Q8N8P6 123 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 LSM10Q969L4 123 aaKnown RBP0.29□□□□□ -2.36
MRPL42-205ENST00000549561 PPP3R2Q96LZ3 170 aa0.29□□□□□ -2.36
MRPL42-205ENST00000549561 ZMYM4Q5VZL5 1548 aa0.28□□□□□ -2.36
MRPL42-205ENST00000549561 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
MRPL42-205ENST00000549561 PPP1R17O96001 155 aa0.28□□□□□ -2.36
MRPL42-205ENST00000549561 SPINK1P00995 79 aa0.28□□□□□ -2.36
MRPL42-205ENST00000549561 C10orf128Q5T292 105 aa0.28□□□□□ -2.36
MRPL42-205ENST00000549561 R4GMQ9 66 aa0.28□□□□□ -2.36
MRPL42-205ENST00000549561 GOLGA3Q08378 1498 aa0.28□□□□□ -2.37
MRPL42-205ENST00000549561 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
MRPL42-205ENST00000549561 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
MRPL42-205ENST00000549561 MYH8P13535 1937 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 APOC2P02655 101 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 CCL18P55774 89 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 RPL13AP3Q6NVV1 102 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 TTC9CQ8N5M4 171 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 FAM213BQ8TBF2 198 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 POLQO75417 2590 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 PHLPP1O60346 1717 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 FOCADQ5VW36 1801 aa0.27□□□□□ -2.37
MRPL42-205ENST00000549561 PIEZO1Q92508 2521 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms