RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
DDX54-206ENST00000549271 VAX2Q9UIW0 290 aa8.03□□□□□ -1.12
DDX54-206ENST00000549271 TRAV8-3A0A0A6YYJ7 113 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 IGLC6P0CF74 106 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 GZMBP10144 247 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 GNG4P50150 75 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 RAB4BP61018 213 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 ALKAL2Q6UX46 152 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 SMIM12Q96EX1 92 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 KIF25-AS1Q9Y6Z4 181 aa8.02□□□□□ -1.13
DDX54-206ENST00000549271 A0A087WWC5 75 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 TRBV10-1A0A0K0K1A3 114 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 RBFOX3A6NFN3 312 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 NKX2-5P52952 324 aaPredicted RBP8.01□□□□□ -1.13
DDX54-206ENST00000549271 UBE2D3P61077 147 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 SSTP61278 116 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 UBE2D2P62837 147 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 WFDC2Q14508 124 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 TOR2AQ5JU69 321 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 OR10G8Q8NGN5 311 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 LYPD6BQ8NI32 183 aa8.01□□□□□ -1.13
DDX54-206ENST00000549271 TRBV7-3A0A075B6L6 115 aa8□□□□□ -1.13
DDX54-206ENST00000549271 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
DDX54-206ENST00000549271 BLOC1S1P78537 153 aa8□□□□□ -1.13
DDX54-206ENST00000549271 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
DDX54-206ENST00000549271 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
DDX54-206ENST00000549271 DAZAP1Q96EP5 407 aaKnown RBP8□□□□□ -1.13
DDX54-206ENST00000549271 COX11Q9Y6N1 276 aa8□□□□□ -1.13
DDX54-206ENST00000549271 RPS20P60866 119 aaKnown RBP7.99□□□□□ -1.13
DDX54-206ENST00000549271 RPL36AP83881 106 aaKnown RBP7.99□□□□□ -1.13
DDX54-206ENST00000549271 DAZ4Q86SG3 579 aaKnown RBP7.99□□□□□ -1.13
DDX54-206ENST00000549271 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
DDX54-206ENST00000549271 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
DDX54-206ENST00000549271 RPL36ALQ969Q0 106 aaKnown RBP7.99□□□□□ -1.13
DDX54-206ENST00000549271 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
DDX54-206ENST00000549271 DAZ3Q9NR90 486 aaKnown RBP7.99□□□□□ -1.13
DDX54-206ENST00000549271 K7EN84 100 aa7.98□□□□□ -1.13
DDX54-206ENST00000549271 P01737 135 aa7.98□□□□□ -1.13
DDX54-206ENST00000549271 ZNF56Q15929 161 aa7.98□□□□□ -1.13
DDX54-206ENST00000549271 NIT1Q86X76 327 aa7.98□□□□□ -1.13
DDX54-206ENST00000549271 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
DDX54-206ENST00000549271 F5H697 171 aa7.97□□□□□ -1.13
DDX54-206ENST00000549271 HNRNPA3P51991 378 aaKnown RBP7.97□□□□□ -1.13
DDX54-206ENST00000549271 LYZL1Q6UWQ5 148 aa7.97□□□□□ -1.13
DDX54-206ENST00000549271 CHAC1Q9BUX1 264 aa7.97□□□□□ -1.13
DDX54-206ENST00000549271 TPPP3Q9BW30 176 aa7.97□□□□□ -1.13
DDX54-206ENST00000549271 BIN3Q9NQY0 253 aa7.97□□□□□ -1.13
DDX54-206ENST00000549271 F2Z2F3 143 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 TMEM250H0YL14 139 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 CACNG7P62955 275 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 CIRBP-AS1Q8TBR5 109 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 RMI2Q96E14 147 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 DNAJC30Q96LL9 226 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 AP1S3Q96PC3 154 aa7.96□□□□□ -1.14
DDX54-206ENST00000549271 TRBV6-8A0A0A6YYG3 113 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 XKRY2A2RUG3 117 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 M0QY20 66 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 SMIM17P0DL12 118 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 WDR73Q6P4I2 378 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 Q8N976 141 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 BAALCQ8WXS3 180 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
DDX54-206ENST00000549271 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
DDX54-206ENST00000549271 LECT2O14960 151 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 NTF3P20783 257 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 ATRAIDQ6UW56 229 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 KLK12Q9UKR0 248 aa7.94□□□□□ -1.14
DDX54-206ENST00000549271 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.93□□□□□ -1.14
DDX54-206ENST00000549271 CTRLP40313 264 aa7.93□□□□□ -1.14
DDX54-206ENST00000549271 SUMO4Q6EEV6 95 aa7.93□□□□□ -1.14
DDX54-206ENST00000549271 CNFNQ9BYD5 112 aa7.93□□□□□ -1.14
DDX54-206ENST00000549271 RPP21Q9H633 154 aaKnown RBP7.93□□□□□ -1.14
DDX54-206ENST00000549271 URGCP-MRPS24S4R325 110 aa7.93□□□□□ -1.14
DDX54-206ENST00000549271 A0A087WX48 190 aa7.92□□□□□ -1.14
DDX54-206ENST00000549271 NDUFS6O75380 124 aaKnown RBP7.92□□□□□ -1.14
DDX54-206ENST00000549271 MGPP08493 103 aa7.92□□□□□ -1.14
DDX54-206ENST00000549271 ELOBQ15370 118 aa7.92□□□□□ -1.14
DDX54-206ENST00000549271 GTSF1Q8WW33 167 aa7.92□□□□□ -1.14
DDX54-206ENST00000549271 FAM210AQ96ND0 272 aa7.92□□□□□ -1.14
DDX54-206ENST00000549271 IGKV2D-24A0A075B6R9 120 aa7.91□□□□□ -1.14
DDX54-206ENST00000549271 TMEM262E9PQX1 116 aa7.91□□□□□ -1.14
DDX54-206ENST00000549271 TRGC1P0CF51 173 aa7.91□□□□□ -1.14
DDX54-206ENST00000549271 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
DDX54-206ENST00000549271 ENHOQ6UWT2 76 aa7.91□□□□□ -1.14
DDX54-206ENST00000549271 FAM231DQ6ZW35 169 aa7.91□□□□□ -1.14
DDX54-206ENST00000549271 EIF5A2Q9GZV4 153 aaKnown RBP7.91□□□□□ -1.14
DDX54-206ENST00000549271 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
DDX54-206ENST00000549271 H7C1H1 209 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 GATCO43716 136 aaKnown RBP7.9□□□□□ -1.14
DDX54-206ENST00000549271 SRP19P09132 144 aaKnown RBP7.9□□□□□ -1.14
DDX54-206ENST00000549271 CEBPGP53567 150 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 Q0VG73 95 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 TWIST1Q15672 202 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 MPV17L2Q567V2 206 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.14
DDX54-206ENST00000549271 RASL11AQ6T310 242 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms