RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 APRG1Q8IVJ8 170 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 DEFB124Q8NES8 71 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 TMEM263Q8WUH6 116 aaKnown RBP3.87□□□□□ -1.79
UBE2N-202ENST00000548946 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 FAM19A4Q96LR4 140 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 LINC00477Q96M19 166 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 KIR2DL4Q99706 377 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 MINOS1-NBL1R4GNA1 71 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 EYSQ5T1H1 3165 aa3.87□□□□□ -1.79
UBE2N-202ENST00000548946 DSPP15924 2871 aaKnown RBP3.86□□□□□ -1.79
UBE2N-202ENST00000548946 TRAV21A0A0B4J279 112 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 SOCS3O14543 225 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 OVOL1O14753 267 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 HERVK_113P61574 105 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 PMVKQ15126 192 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 C15orf32Q32M92 178 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 Q6Q795 121 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 SFTA2Q6UW10 78 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 VMO1Q7Z5L0 202 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 TEX29Q8N6K0 151 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 C14orf178Q8N769 122 aaPredicted RBP3.86□□□□□ -1.79
UBE2N-202ENST00000548946 TIMD4Q96H15 378 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 METTL26Q96S19 204 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 TIMM17AQ99595 171 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 PYGO1Q9Y3Y4 419 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 WNK2Q9Y3S1 2297 aa3.86□□□□□ -1.79
UBE2N-202ENST00000548946 RP1L1Q8IWN7 2480 aaPredicted RBP3.85□□□□□ -1.79
UBE2N-202ENST00000548946 IGHV3OR16-13A0A075B7E8 117 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 IGHV3-49A0A0A0MS15 119 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 IGHV3-74A0A0B4J1X5 117 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 A0A0B4J2C4 111 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 LEPROTO15243 131 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 SLC25A20O43772 301 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 RNASE3P12724 160 aaKnown RBP3.85□□□□□ -1.79
UBE2N-202ENST00000548946 RPL13AP40429 203 aaKnown RBP3.85□□□□□ -1.79
UBE2N-202ENST00000548946 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 ZNRF2Q8NHG8 242 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 EEF1AKMT3Q96AZ1 226 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 SS18L2Q9UHA2 77 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 PRRC2CQ9Y520 2896 aaKnown RBP3.85□□□□□ -1.79
UBE2N-202ENST00000548946 CUL9Q8IWT3 2517 aa3.85□□□□□ -1.79
UBE2N-202ENST00000548946 FREM2Q5SZK8 3169 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 VPS13AQ96RL7 3174 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 ARHGAP32A7KAX9 2087 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 TRBV7-1A0A0A6YYK4 115 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 TRBV7-9A0A0J9YWB2 115 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 A0A0J9YX75 114 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 A4D1N5 150 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 C9JAW5 83 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 J3QQQ9 107 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 M0R2P5 195 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 ATP6V0E1O15342 81 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 GNRH2O43555 120 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 MGPP08493 103 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 SCGB1C2P0DMR2 95 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 NDUFV3P56181 108 aaKnown RBP3.84□□□□□ -1.79
UBE2N-202ENST00000548946 GAGE2BQ13066 116 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 MRPL23Q16540 153 aaKnown RBP3.84□□□□□ -1.79
UBE2N-202ENST00000548946 LINC01620Q4KN68 170 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 GAGE2EQ4V326 116 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 DEFB121Q5J5C9 76 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 GAGE2AQ6NT46 116 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 MUSTN1Q8IVN3 82 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 ODF3Q96PU9 254 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 SIRPDQ9H106 197 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 GAGE2DQ9UEU5 116 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 TP53TG1Q9Y2A0 90 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 PHLDA3Q9Y5J5 127 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 POLEQ07864 2286 aa3.84□□□□□ -1.79
UBE2N-202ENST00000548946 CNOT1A5YKK6 2376 aaKnown RBP3.84□□□□□ -1.79
UBE2N-202ENST00000548946 TPRP12270 2363 aaKnown RBP3.83□□□□□ -1.8
UBE2N-202ENST00000548946 TRAV4A0A0B4J268 109 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 TRBV27A0A0K0K1C4 114 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 TRBV10-2A0A0K0K1G8 114 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 G3V318 75 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 CCDC179H3BU77 68 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 LGALS9O00182 355 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 TGFAP01135 160 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 IGHV1-69P01742 117 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
UBE2N-202ENST00000548946 RNASE4P34096 147 aaKnown RBP3.83□□□□□ -1.8
UBE2N-202ENST00000548946 EMP1P54849 157 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 DSCR10P59022 87 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 DEFB1P60022 68 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
UBE2N-202ENST00000548946 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 ECSCRQ19T08 205 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 TMEM95Q3KNT9 176 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 C11orf71Q6IPW1 123 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 OR10J6PQ8NGY7 276 aa3.83□□□□□ -1.8
UBE2N-202ENST00000548946 LINC01560Q8TB33 94 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms