RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-223ENST00000545153 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
PTPN6-223ENST00000545153 M0QY20 66 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
PTPN6-223ENST00000545153 CT83Q5H943 113 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 SUMO4Q6EEV6 95 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 ISOC2Q96AB3 205 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 DPH3P1Q9H4G8 78 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 NAT8Q9UHE5 227 aa9.69□□□□□ -0.86
PTPN6-223ENST00000545153 ADIRFQ15847 76 aa9.68□□□□□ -0.86
PTPN6-223ENST00000545153 Q6ZRN7 208 aaPredicted RBP9.68□□□□□ -0.86
PTPN6-223ENST00000545153 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
PTPN6-223ENST00000545153 Q8N3U1 123 aa9.68□□□□□ -0.86
PTPN6-223ENST00000545153 C10orf126Q8N4M7 172 aa9.68□□□□□ -0.86
PTPN6-223ENST00000545153 C15orf54Q8N8G6 183 aa9.68□□□□□ -0.86
PTPN6-223ENST00000545153 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
PTPN6-223ENST00000545153 IBA57-AS1B1ANH7 110 aa9.67□□□□□ -0.86
PTPN6-223ENST00000545153 H7C1H1 209 aa9.67□□□□□ -0.86
PTPN6-223ENST00000545153 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
PTPN6-223ENST00000545153 V9GYV3 84 aa9.67□□□□□ -0.86
PTPN6-223ENST00000545153 IFITM2Q01629 132 aa9.66□□□□□ -0.86
PTPN6-223ENST00000545153 RASL11AQ6T310 242 aa9.66□□□□□ -0.86
PTPN6-223ENST00000545153 SMIM15Q7Z3B0 74 aa9.66□□□□□ -0.86
PTPN6-223ENST00000545153 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.66□□□□□ -0.86
PTPN6-223ENST00000545153 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
PTPN6-223ENST00000545153 GFRA4Q9GZZ7 299 aa9.66□□□□□ -0.86
PTPN6-223ENST00000545153 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
PTPN6-223ENST00000545153 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
PTPN6-223ENST00000545153 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
PTPN6-223ENST00000545153 CLLU1Q5K131 121 aa9.65□□□□□ -0.86
PTPN6-223ENST00000545153 DAZ4Q86SG3 579 aaKnown RBP9.65□□□□□ -0.86
PTPN6-223ENST00000545153 NIT1Q86X76 327 aa9.65□□□□□ -0.86
PTPN6-223ENST00000545153 DAZ3Q9NR90 486 aaKnown RBP9.65□□□□□ -0.86
PTPN6-223ENST00000545153 PKHD1P08F94 4074 aa9.65□□□□□ -0.87
PTPN6-223ENST00000545153 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
PTPN6-223ENST00000545153 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
PTPN6-223ENST00000545153 GATD1Q8NB37 220 aa9.64□□□□□ -0.87
PTPN6-223ENST00000545153 Q9HAA7 133 aa9.64□□□□□ -0.87
PTPN6-223ENST00000545153 NIT2Q9NQR4 276 aa9.64□□□□□ -0.87
PTPN6-223ENST00000545153 URGCP-MRPS24S4R325 110 aa9.64□□□□□ -0.87
PTPN6-223ENST00000545153 TRAV26-2A0A0B4J265 109 aa9.63□□□□□ -0.87
PTPN6-223ENST00000545153 A0A1B0GUT8 65 aa9.63□□□□□ -0.87
PTPN6-223ENST00000545153 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
PTPN6-223ENST00000545153 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
PTPN6-223ENST00000545153 A0A087WX48 190 aa9.62□□□□□ -0.87
PTPN6-223ENST00000545153 TMEM97Q5BJF2 176 aa9.62□□□□□ -0.87
PTPN6-223ENST00000545153 SPATA12Q7Z6I5 190 aa9.62□□□□□ -0.87
PTPN6-223ENST00000545153 NAT8BQ9UHF3 227 aa9.62□□□□□ -0.87
PTPN6-223ENST00000545153 RIGQ13278 110 aa9.61□□□□□ -0.87
PTPN6-223ENST00000545153 KCNIP4Q6PIL6 250 aa9.61□□□□□ -0.87
PTPN6-223ENST00000545153 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
PTPN6-223ENST00000545153 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
PTPN6-223ENST00000545153 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
PTPN6-223ENST00000545153 SMIM27A0A1W2PRY6 76 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 PSCAO43653 123 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 KRTAP10-2P60368 255 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 LAGE3Q14657 143 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 FRZBQ92765 325 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 RPL39LQ96EH5 51 aaKnown RBP9.6□□□□□ -0.87
PTPN6-223ENST00000545153 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
PTPN6-223ENST00000545153 TRBV25-1A0A075B6N4 114 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 A0A087WTM6 91 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 EREGO14944 169 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 GAGE6Q13070 117 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 ELOBQ15370 118 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 CHCHD7Q9BUK0 85 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 HERC2O95714 4834 aa9.59□□□□□ -0.87
PTPN6-223ENST00000545153 IGHV1-24A0A0C4DH33 117 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 C16orf90A8MZG2 172 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 RAB4AP20338 218 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 ATRAIDQ6UW56 229 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 RNF185Q96GF1 192 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 TM2D2Q9BX73 214 aa9.58□□□□□ -0.88
PTPN6-223ENST00000545153 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
PTPN6-223ENST00000545153 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
PTPN6-223ENST00000545153 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
PTPN6-223ENST00000545153 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
PTPN6-223ENST00000545153 Q8N976 141 aa9.57□□□□□ -0.88
PTPN6-223ENST00000545153 CAMPP49913 170 aa9.56□□□□□ -0.88
PTPN6-223ENST00000545153 PKIAP61925 76 aa9.56□□□□□ -0.88
PTPN6-223ENST00000545153 COTL1Q14019 142 aa9.56□□□□□ -0.88
PTPN6-223ENST00000545153 PGPEP1Q9NXJ5 209 aa9.56□□□□□ -0.88
PTPN6-223ENST00000545153 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
PTPN6-223ENST00000545153 PPP1R2P9O14990 202 aa9.55□□□□□ -0.88
PTPN6-223ENST00000545153 ANGP03950 147 aaKnown RBP9.55□□□□□ -0.88
PTPN6-223ENST00000545153 RBX1P62877 108 aa9.55□□□□□ -0.88
PTPN6-223ENST00000545153 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
PTPN6-223ENST00000545153 TMEM243Q9BU79 118 aa9.55□□□□□ -0.88
PTPN6-223ENST00000545153 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
PTPN6-223ENST00000545153 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
PTPN6-223ENST00000545153 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
PTPN6-223ENST00000545153 SMKR1H3BMG3 65 aa9.54□□□□□ -0.88
PTPN6-223ENST00000545153 AMTP48728 403 aa9.54□□□□□ -0.88
PTPN6-223ENST00000545153 UQCC3Q6UW78 93 aa9.54□□□□□ -0.88
PTPN6-223ENST00000545153 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms