RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 FAM231DQ6ZW35 169 aa10.58□□□□□ -0.72
CCDC78-216ENST00000544996 SRP19P09132 144 aaKnown RBP10.57□□□□□ -0.72
CCDC78-216ENST00000544996 TWIST1Q15672 202 aa10.57□□□□□ -0.72
CCDC78-216ENST00000544996 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
CCDC78-216ENST00000544996 NIT1Q86X76 327 aa10.57□□□□□ -0.72
CCDC78-216ENST00000544996 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
CCDC78-216ENST00000544996 PKHD1P08F94 4074 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 A0A087WTM6 91 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 A0A087WX48 190 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 TRBV6-8A0A0A6YYG3 113 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 A8MWL6 223 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 KRTAP10-2P60368 255 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 TMEM97Q5BJF2 176 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 Q8N3U1 123 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 TM2D2Q9BX73 214 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 DPH3P1Q9H4G8 78 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
CCDC78-216ENST00000544996 M0QY20 66 aa10.55□□□□□ -0.72
CCDC78-216ENST00000544996 ELOBQ15370 118 aa10.55□□□□□ -0.72
CCDC78-216ENST00000544996 SMIM15Q7Z3B0 74 aa10.55□□□□□ -0.72
CCDC78-216ENST00000544996 LINC01551Q86U37 167 aa10.55□□□□□ -0.72
CCDC78-216ENST00000544996 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
CCDC78-216ENST00000544996 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 PEA15Q15121 130 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 FAM74A3Q4VXF1 159 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 CT83Q5H943 113 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 SUMO4Q6EEV6 95 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 CDPF1Q6NVV7 123 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 GTSF1Q8WW33 167 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
CCDC78-216ENST00000544996 PKIAP61925 76 aa10.53□□□□□ -0.72
CCDC78-216ENST00000544996 RASL11AQ6T310 242 aa10.53□□□□□ -0.72
CCDC78-216ENST00000544996 BORCS7Q96B45 105 aa10.53□□□□□ -0.72
CCDC78-216ENST00000544996 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
CCDC78-216ENST00000544996 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 RMI2Q96E14 147 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 PGLYRP4Q96LB8 373 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 OSTCQ9NRP0 149 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 KLK12Q9UKR0 248 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 COX11Q9Y6N1 276 aa10.52□□□□□ -0.73
CCDC78-216ENST00000544996 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
CCDC78-216ENST00000544996 TSKUQ8WUA8 353 aa10.51□□□□□ -0.73
CCDC78-216ENST00000544996 NIT2Q9NQR4 276 aa10.51□□□□□ -0.73
CCDC78-216ENST00000544996 TRBV25-1A0A075B6N4 114 aa10.5□□□□□ -0.73
CCDC78-216ENST00000544996 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
CCDC78-216ENST00000544996 FRZBQ92765 325 aa10.5□□□□□ -0.73
CCDC78-216ENST00000544996 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
CCDC78-216ENST00000544996 DYNC1H1Q14204 4646 aaKnown RBP10.5□□□□□ -0.73
CCDC78-216ENST00000544996 FAM231BA6NCW3 169 aa10.49□□□□□ -0.73
CCDC78-216ENST00000544996 Q0VG73 95 aa10.49□□□□□ -0.73
CCDC78-216ENST00000544996 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
CCDC78-216ENST00000544996 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
CCDC78-216ENST00000544996 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
CCDC78-216ENST00000544996 IGHV1-24A0A0C4DH33 117 aa10.48□□□□□ -0.73
CCDC78-216ENST00000544996 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
CCDC78-216ENST00000544996 HIGD1CA8MV81 97 aa10.48□□□□□ -0.73
CCDC78-216ENST00000544996 C9JQL5 133 aa10.48□□□□□ -0.73
CCDC78-216ENST00000544996 ADIRFQ15847 76 aa10.48□□□□□ -0.73
CCDC78-216ENST00000544996 ISOC2Q96AB3 205 aa10.48□□□□□ -0.73
CCDC78-216ENST00000544996 KIAA1109Q2LD37 5005 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 IGKV2D-24A0A075B6R9 120 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 A0A1B0GUT8 65 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 CRPP02741 224 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 ANGP03950 147 aaKnown RBP10.47□□□□□ -0.73
CCDC78-216ENST00000544996 FUSP35637 526 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC78-216ENST00000544996 RAB14P61106 215 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 RPL23P62829 140 aaKnown RBP10.47□□□□□ -0.73
CCDC78-216ENST00000544996 SRSF3P84103 164 aaKnown RBP10.47□□□□□ -0.73
CCDC78-216ENST00000544996 IQCJQ1A5X6 159 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
CCDC78-216ENST00000544996 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
CCDC78-216ENST00000544996 TRAV26-2A0A0B4J265 109 aa10.46□□□□□ -0.73
CCDC78-216ENST00000544996 IFITM2Q01629 132 aa10.46□□□□□ -0.73
CCDC78-216ENST00000544996 GAGE6Q13070 117 aa10.46□□□□□ -0.73
CCDC78-216ENST00000544996 Q8N814 137 aa10.46□□□□□ -0.73
CCDC78-216ENST00000544996 GATD1Q8NB37 220 aa10.46□□□□□ -0.73
CCDC78-216ENST00000544996 V9GYV3 84 aa10.46□□□□□ -0.73
CCDC78-216ENST00000544996 IGLV5-52A0A0A0MRZ9 124 aa10.45□□□□□ -0.74
CCDC78-216ENST00000544996 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
CCDC78-216ENST00000544996 Q8N976 141 aa10.45□□□□□ -0.74
CCDC78-216ENST00000544996 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
CCDC78-216ENST00000544996 GCSHP23434 173 aa10.44□□□□□ -0.74
CCDC78-216ENST00000544996 RBX1P62877 108 aa10.44□□□□□ -0.74
CCDC78-216ENST00000544996 COTL1Q14019 142 aa10.44□□□□□ -0.74
CCDC78-216ENST00000544996 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
CCDC78-216ENST00000544996 NAT8BQ9UHF3 227 aa10.44□□□□□ -0.74
CCDC78-216ENST00000544996 RIGQ13278 110 aa10.43□□□□□ -0.74
CCDC78-216ENST00000544996 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
CCDC78-216ENST00000544996 TMEM191AQ9H0A3 160 aa10.43□□□□□ -0.74
CCDC78-216ENST00000544996 HERC2O95714 4834 aa10.43□□□□□ -0.74
CCDC78-216ENST00000544996 UBE2L6O14933 153 aa10.42□□□□□ -0.74
CCDC78-216ENST00000544996 LECT2O14960 151 aa10.42□□□□□ -0.74
CCDC78-216ENST00000544996 AMTP48728 403 aa10.42□□□□□ -0.74
CCDC78-216ENST00000544996 MIAQ16674 131 aa10.42□□□□□ -0.74
CCDC78-216ENST00000544996 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms