RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 M0QY20 66 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 IGHV3-30P01768 117 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 IGHV3-33P01772 117 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 IGHV3-30-3P0DP02 117 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 IGHV3-30-5P0DP03 117 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 RPL23P62829 140 aaKnown RBP14.72□□□□□ -0.05
OTUB1-212ENST00000543988 PGLYRP4Q96LB8 373 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 NAT8Q9UHE5 227 aa14.72□□□□□ -0.05
OTUB1-212ENST00000543988 DYNC1H1Q14204 4646 aaKnown RBP14.71□□□□□ -0.05
OTUB1-212ENST00000543988 RAB14P61106 215 aa14.71□□□□□ -0.05
OTUB1-212ENST00000543988 ADIRFQ15847 76 aa14.71□□□□□ -0.05
OTUB1-212ENST00000543988 DPH3P1Q9H4G8 78 aa14.71□□□□□ -0.05
OTUB1-212ENST00000543988 C15orf54Q8N8G6 183 aa14.7□□□□□ -0.06
OTUB1-212ENST00000543988 TSKUQ8WUA8 353 aa14.7□□□□□ -0.06
OTUB1-212ENST00000543988 V9GYV3 84 aa14.7□□□□□ -0.06
OTUB1-212ENST00000543988 HIGD1CA8MV81 97 aa14.68□□□□□ -0.06
OTUB1-212ENST00000543988 H7C1H1 209 aa14.68□□□□□ -0.06
OTUB1-212ENST00000543988 FOXA3P55318 350 aaPredicted RBP14.68□□□□□ -0.06
OTUB1-212ENST00000543988 NFE4Q86UQ8 179 aa14.68□□□□□ -0.06
OTUB1-212ENST00000543988 IBA57-AS1B1ANH7 110 aa14.67□□□□□ -0.06
OTUB1-212ENST00000543988 GFRA4Q9GZZ7 299 aa14.67□□□□□ -0.06
OTUB1-212ENST00000543988 IFITM2Q01629 132 aa14.66□□□□□ -0.06
OTUB1-212ENST00000543988 CLLU1Q5K131 121 aa14.66□□□□□ -0.06
OTUB1-212ENST00000543988 RASL11AQ6T310 242 aa14.66□□□□□ -0.06
OTUB1-212ENST00000543988 TRBV6-8A0A0A6YYG3 113 aa14.65□□□□□ -0.06
OTUB1-212ENST00000543988 FAM231BA6NCW3 169 aa14.65□□□□□ -0.06
OTUB1-212ENST00000543988 NIT1Q86X76 327 aa14.65□□□□□ -0.06
OTUB1-212ENST00000543988 DNAJC30Q96LL9 226 aa14.65□□□□□ -0.06
OTUB1-212ENST00000543988 SMIM15Q7Z3B0 74 aa14.64□□□□□ -0.07
OTUB1-212ENST00000543988 DAZ4Q86SG3 579 aaKnown RBP14.64□□□□□ -0.07
OTUB1-212ENST00000543988 BORCS7Q96B45 105 aa14.64□□□□□ -0.07
OTUB1-212ENST00000543988 Q9HAA7 133 aa14.64□□□□□ -0.07
OTUB1-212ENST00000543988 DAZ3Q9NR90 486 aaKnown RBP14.64□□□□□ -0.07
OTUB1-212ENST00000543988 TRAV26-2A0A0B4J265 109 aa14.63□□□□□ -0.07
OTUB1-212ENST00000543988 A0A1B0GUT8 65 aa14.63□□□□□ -0.07
OTUB1-212ENST00000543988 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.63□□□□□ -0.07
OTUB1-212ENST00000543988 LAGE3Q14657 143 aa14.62□□□□□ -0.07
OTUB1-212ENST00000543988 NTM-AS1Q6ZSK4 140 aa14.62□□□□□ -0.07
OTUB1-212ENST00000543988 GATD1Q8NB37 220 aa14.62□□□□□ -0.07
OTUB1-212ENST00000543988 NUP35Q8NFH5 326 aa14.62□□□□□ -0.07
OTUB1-212ENST00000543988 NIT2Q9NQR4 276 aa14.61□□□□□ -0.07
OTUB1-212ENST00000543988 URGCP-MRPS24S4R325 110 aa14.61□□□□□ -0.07
OTUB1-212ENST00000543988 KIAA1109Q2LD37 5005 aa14.59□□□□□ -0.07
OTUB1-212ENST00000543988 A0A087WX48 190 aa14.59□□□□□ -0.07
OTUB1-212ENST00000543988 TMEM97Q5BJF2 176 aa14.59□□□□□ -0.07
OTUB1-212ENST00000543988 SPATA12Q7Z6I5 190 aa14.59□□□□□ -0.07
OTUB1-212ENST00000543988 CHCHD5Q9BSY4 110 aa14.59□□□□□ -0.07
OTUB1-212ENST00000543988 NAT8BQ9UHF3 227 aa14.59□□□□□ -0.07
OTUB1-212ENST00000543988 SMIM27A0A1W2PRY6 76 aa14.58□□□□□ -0.08
OTUB1-212ENST00000543988 KRTAP10-2P60368 255 aa14.58□□□□□ -0.08
OTUB1-212ENST00000543988 RPL39LQ96EH5 51 aaKnown RBP14.58□□□□□ -0.08
OTUB1-212ENST00000543988 CHCHD7Q9BUK0 85 aa14.58□□□□□ -0.08
OTUB1-212ENST00000543988 A0A087WTM6 91 aa14.57□□□□□ -0.08
OTUB1-212ENST00000543988 FRZBQ92765 325 aa14.57□□□□□ -0.08
OTUB1-212ENST00000543988 TMEM191AQ9H0A3 160 aa14.57□□□□□ -0.08
OTUB1-212ENST00000543988 KLK12Q9UKR0 248 aa14.57□□□□□ -0.08
OTUB1-212ENST00000543988 TRBV25-1A0A075B6N4 114 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 C16orf90A8MZG2 172 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 TMEM262E9PQX1 116 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 RIGQ13278 110 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 IQCJQ1A5X6 159 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 MPV17L2Q567V2 206 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 KCNIP4Q6PIL6 250 aa14.56□□□□□ -0.08
OTUB1-212ENST00000543988 TRAV8-3A0A0A6YYJ7 113 aa14.55□□□□□ -0.08
OTUB1-212ENST00000543988 IGHV1-24A0A0C4DH33 117 aa14.55□□□□□ -0.08
OTUB1-212ENST00000543988 PSCAO43653 123 aa14.55□□□□□ -0.08
OTUB1-212ENST00000543988 DEFB104AQ8WTQ1 72 aa14.55□□□□□ -0.08
OTUB1-212ENST00000543988 RNF185Q96GF1 192 aa14.55□□□□□ -0.08
OTUB1-212ENST00000543988 HERC2O95714 4834 aa14.55□□□□□ -0.08
OTUB1-212ENST00000543988 GAGE6Q13070 117 aa14.54□□□□□ -0.08
OTUB1-212ENST00000543988 AMN1Q8IY45 258 aa14.54□□□□□ -0.08
OTUB1-212ENST00000543988 LRP1BQ9NZR2 4599 aa14.54□□□□□ -0.08
OTUB1-212ENST00000543988 EREGO14944 169 aa14.53□□□□□ -0.08
OTUB1-212ENST00000543988 GAS8-AS1O95177 125 aa14.53□□□□□ -0.08
OTUB1-212ENST00000543988 PKIAP61925 76 aa14.53□□□□□ -0.08
OTUB1-212ENST00000543988 ELOBQ15370 118 aa14.52□□□□□ -0.09
OTUB1-212ENST00000543988 Q8N976 141 aa14.52□□□□□ -0.09
OTUB1-212ENST00000543988 UBE2WQ96B02 151 aa14.52□□□□□ -0.09
OTUB1-212ENST00000543988 TM2D2Q9BX73 214 aa14.52□□□□□ -0.09
OTUB1-212ENST00000543988 DNAH5Q8TE73 4624 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 LRCOL1A6NCL2 159 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 RAB4AP20338 218 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 FUSP35637 526 aaKnown RBP eCLIP14.51□□□□□ -0.09
OTUB1-212ENST00000543988 RBX1P62877 108 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 PNRC1Q12796 327 aaPredicted RBP14.51□□□□□ -0.09
OTUB1-212ENST00000543988 COTL1Q14019 142 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 ATRAIDQ6UW56 229 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 TMEM243Q9BU79 118 aa14.51□□□□□ -0.09
OTUB1-212ENST00000543988 MRAP2Q96G30 205 aa14.5□□□□□ -0.09
OTUB1-212ENST00000543988 TRBV6-5A0A0K0K1A5 114 aa14.49□□□□□ -0.09
OTUB1-212ENST00000543988 SDHAF1A6NFY7 115 aa14.49□□□□□ -0.09
OTUB1-212ENST00000543988 ANGP03950 147 aaKnown RBP14.49□□□□□ -0.09
OTUB1-212ENST00000543988 RPS10P46783 165 aaKnown RBP14.49□□□□□ -0.09
OTUB1-212ENST00000543988 AMTP48728 403 aa14.49□□□□□ -0.09
OTUB1-212ENST00000543988 CAMPP49913 170 aa14.49□□□□□ -0.09
OTUB1-212ENST00000543988 MRPL54Q6P161 138 aaKnown RBP14.49□□□□□ -0.09
OTUB1-212ENST00000543988 UQCC3Q6UW78 93 aa14.49□□□□□ -0.09
OTUB1-212ENST00000543988 SMKR1H3BMG3 65 aa14.48□□□□□ -0.09
OTUB1-212ENST00000543988 PPP1R2P9O14990 202 aa14.48□□□□□ -0.09
OTUB1-212ENST00000543988 NCR2O95944 276 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms