RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 ZNF56Q15929 161 aa12.87□□□□□ -0.35
TPBG-203ENST00000543496 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
TPBG-203ENST00000543496 BRD3OSQ6XYD6 125 aa12.87□□□□□ -0.35
TPBG-203ENST00000543496 TRBV27A0A0K0K1C4 114 aa12.87□□□□□ -0.35
TPBG-203ENST00000543496 IGHV4-39P01824 125 aa12.87□□□□□ -0.35
TPBG-203ENST00000543496 ZNF580Q9UK33 172 aa12.87□□□□□ -0.35
TPBG-203ENST00000543496 KLLNB2CW77 178 aa12.86□□□□□ -0.35
TPBG-203ENST00000543496 LY6EQ16553 131 aa12.86□□□□□ -0.35
TPBG-203ENST00000543496 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
TPBG-203ENST00000543496 TMEM223A0PJW6 202 aa12.86□□□□□ -0.35
TPBG-203ENST00000543496 LEPROTO15243 131 aa12.86□□□□□ -0.35
TPBG-203ENST00000543496 IGKV3-20P01619 116 aa12.86□□□□□ -0.35
TPBG-203ENST00000543496 PF4V1P10720 104 aa12.86□□□□□ -0.35
TPBG-203ENST00000543496 LMO4P61968 165 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 TCF15Q12870 199 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 SORL1Q92673 2214 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 K7ENP7 123 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 VPREB3Q9UKI3 123 aa12.85□□□□□ -0.35
TPBG-203ENST00000543496 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 ATP5J2P56134 94 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 A0A0J9YXV3 536 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 M0QXV9 152 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 LGALS9O00182 355 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 FOXC1Q12948 553 aa12.84□□□□□ -0.35
TPBG-203ENST00000543496 TRAV12-2A0A075B6T6 113 aa12.83□□□□□ -0.35
TPBG-203ENST00000543496 ZNF22P17026 224 aaPredicted RBP12.83□□□□□ -0.35
TPBG-203ENST00000543496 Q8N1Y9 231 aa12.83□□□□□ -0.36
TPBG-203ENST00000543496 COL12A1Q99715 3063 aa12.83□□□□□ -0.36
TPBG-203ENST00000543496 P0DMU3 169 aa12.83□□□□□ -0.36
TPBG-203ENST00000543496 FAM231AP0DMU4 169 aa12.83□□□□□ -0.36
TPBG-203ENST00000543496 FAM231CP0DMU5 169 aa12.83□□□□□ -0.36
TPBG-203ENST00000543496 A0A0B4J2C4 111 aa12.82□□□□□ -0.36
TPBG-203ENST00000543496 M0QY20 66 aa12.82□□□□□ -0.36
TPBG-203ENST00000543496 PRRC2AP48634 2157 aaKnown RBP12.82□□□□□ -0.36
TPBG-203ENST00000543496 ABCA2Q9BZC7 2435 aa12.82□□□□□ -0.36
TPBG-203ENST00000543496 TRBV6-5A0A0K0K1A5 114 aa12.82□□□□□ -0.36
TPBG-203ENST00000543496 LINC01620Q4KN68 170 aa12.82□□□□□ -0.36
TPBG-203ENST00000543496 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
TPBG-203ENST00000543496 IGF2RP11717 2491 aa12.81□□□□□ -0.36
TPBG-203ENST00000543496 IGHV1-69P01742 117 aa12.81□□□□□ -0.36
TPBG-203ENST00000543496 ATXN8Q156A1 80 aa12.81□□□□□ -0.36
TPBG-203ENST00000543496 SPXQ9BT56 116 aa12.81□□□□□ -0.36
TPBG-203ENST00000543496 VPS13CQ709C8 3753 aa12.8□□□□□ -0.36
TPBG-203ENST00000543496 DAZ1Q9NQZ3 744 aaKnown RBP12.8□□□□□ -0.36
TPBG-203ENST00000543496 MUC6Q6W4X9 2439 aa12.8□□□□□ -0.36
TPBG-203ENST00000543496 IGHV3-16A0A0C4DH30 117 aa12.8□□□□□ -0.36
TPBG-203ENST00000543496 NSUN5P1Q3KNT7 163 aa12.8□□□□□ -0.36
TPBG-203ENST00000543496 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 PRSS2P07478 247 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 USMG5Q96IX5 58 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 MAP1AP78559 2803 aaPredicted RBP12.79□□□□□ -0.36
TPBG-203ENST00000543496 HIVEP3Q5T1R4 2406 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
TPBG-203ENST00000543496 RHOHQ15669 191 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 C20orf203Q8NBC4 194 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 M0R2P5 195 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 TRIAP1O43715 76 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 BLCAPP62952 87 aa12.79□□□□□ -0.36
TPBG-203ENST00000543496 IGLV4-3A0A075B6K6 122 aa12.78□□□□□ -0.36
TPBG-203ENST00000543496 C9orf85Q96MD7 179 aa12.78□□□□□ -0.36
TPBG-203ENST00000543496 CHCHD5Q9BSY4 110 aa12.78□□□□□ -0.36
TPBG-203ENST00000543496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.78□□□□□ -0.36
TPBG-203ENST00000543496 NPC2P61916 151 aa12.77□□□□□ -0.36
TPBG-203ENST00000543496 DCANP1Q8TF63 244 aa12.77□□□□□ -0.36
TPBG-203ENST00000543496 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.37
TPBG-203ENST00000543496 IGHV3-30-3P0DP02 117 aa12.77□□□□□ -0.37
TPBG-203ENST00000543496 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.37
TPBG-203ENST00000543496 TRAV8-4A0A0B4J246 113 aa12.76□□□□□ -0.37
TPBG-203ENST00000543496 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
TPBG-203ENST00000543496 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
TPBG-203ENST00000543496 I3L3M4 83 aa12.76□□□□□ -0.37
TPBG-203ENST00000543496 H3BUX3 64 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 TIMM21Q9BVV7 248 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 SPINK13Q1W4C9 94 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 CEMP1Q6PRD7 247 aaPredicted RBP12.75□□□□□ -0.37
TPBG-203ENST00000543496 Q6ZSV7 163 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 IGHG2P01859 326 aa12.75□□□□□ -0.37
TPBG-203ENST00000543496 CD28P10747 220 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 H3BMM0 161 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 IGHV4-38-2P0DP08 117 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 UBE2WQ96B02 151 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 DOPEY2Q9Y3R5 2298 aa12.74□□□□□ -0.37
TPBG-203ENST00000543496 TRBV30A0A0K0K1B3 111 aa12.73□□□□□ -0.37
TPBG-203ENST00000543496 A0A0J9YX75 114 aa12.73□□□□□ -0.37
TPBG-203ENST00000543496 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
TPBG-203ENST00000543496 LITAFQ99732 161 aa12.73□□□□□ -0.37
TPBG-203ENST00000543496 IGHV1OR15-1A0A075B7D0 117 aa12.72□□□□□ -0.37
TPBG-203ENST00000543496 A8MZ25 164 aa12.72□□□□□ -0.37
TPBG-203ENST00000543496 ICOSQ9Y6W8 199 aa12.72□□□□□ -0.37
TPBG-203ENST00000543496 H3BUA1 57 aa12.72□□□□□ -0.37
TPBG-203ENST00000543496 HTN1P15515 57 aa12.72□□□□□ -0.37
TPBG-203ENST00000543496 RPL13AP40429 203 aaKnown RBP12.71□□□□□ -0.37
TPBG-203ENST00000543496 CLEC2BQ92478 149 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms