RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 ZNF56Q15929 161 aa10.6□□□□□ -0.71
LINC01089-209ENST00000542933 SMIM15Q7Z3B0 74 aa10.6□□□□□ -0.71
LINC01089-209ENST00000542933 BTF3L4Q96K17 158 aa10.6□□□□□ -0.71
LINC01089-209ENST00000542933 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
LINC01089-209ENST00000542933 DNAH17Q9UFH2 4485 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 EVI2AP22794 236 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 S100A1P23297 94 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 GAGE1Q13065 139 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 GAGE4Q13068 117 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 GAGE5Q13069 117 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
LINC01089-209ENST00000542933 TRAV9-1A0A075B6T8 112 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 A0A1B0GW15 77 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 S100A8P05109 93 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 MGPP08493 103 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 CAMPP49913 170 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 HBBP68871 147 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 ATP5L2Q7Z4Y8 100 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 DPH3P1Q9H4G8 78 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
LINC01089-209ENST00000542933 F5H697 171 aa10.57□□□□□ -0.72
LINC01089-209ENST00000542933 C1orf134Q5TEV5 83 aa10.57□□□□□ -0.72
LINC01089-209ENST00000542933 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
LINC01089-209ENST00000542933 Q9UF83 564 aa10.57□□□□□ -0.72
LINC01089-209ENST00000542933 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
LINC01089-209ENST00000542933 HECTD4Q9Y4D8 3996 aa10.57□□□□□ -0.72
LINC01089-209ENST00000542933 A0A1B0GXF2 115 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 LINC00315P59091 139 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 RPL36AP83881 106 aaKnown RBP10.56□□□□□ -0.72
LINC01089-209ENST00000542933 LELP1Q5T871 98 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 WFDC10BQ8IUB3 73 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 RPL36ALQ969Q0 106 aaKnown RBP10.56□□□□□ -0.72
LINC01089-209ENST00000542933 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 TMEM191AQ9H0A3 160 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 SMCO4Q9NRQ5 59 aa10.56□□□□□ -0.72
LINC01089-209ENST00000542933 TRBV7-3A0A075B6L6 115 aa10.55□□□□□ -0.72
LINC01089-209ENST00000542933 RTL8CO15255 209 aa10.55□□□□□ -0.72
LINC01089-209ENST00000542933 CBLN2Q8IUK8 224 aa10.55□□□□□ -0.72
LINC01089-209ENST00000542933 C6orf223Q8N319 242 aa10.55□□□□□ -0.72
LINC01089-209ENST00000542933 TRAV8-6A0A0B4J262 113 aa10.54□□□□□ -0.72
LINC01089-209ENST00000542933 K7EP13 123 aa10.54□□□□□ -0.72
LINC01089-209ENST00000542933 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
LINC01089-209ENST00000542933 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
LINC01089-209ENST00000542933 ELOBQ15370 118 aa10.54□□□□□ -0.72
LINC01089-209ENST00000542933 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
LINC01089-209ENST00000542933 TGIF2-C20orf24A0A0A6YYL0 155 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 H7C1H1 209 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 UBE2D3P61077 147 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 UBE2D2P62837 147 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 RASL11AQ6T310 242 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
LINC01089-209ENST00000542933 TRAV9-2A0A087WT02 112 aa10.52□□□□□ -0.73
LINC01089-209ENST00000542933 IGHV3-38A0A0C4DH36 116 aa10.52□□□□□ -0.73
LINC01089-209ENST00000542933 SCO1O75880 301 aa10.52□□□□□ -0.73
LINC01089-209ENST00000542933 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
LINC01089-209ENST00000542933 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
LINC01089-209ENST00000542933 TRBV24-1A0A075B6N3 115 aa10.51□□□□□ -0.73
LINC01089-209ENST00000542933 M0QY20 66 aa10.51□□□□□ -0.73
LINC01089-209ENST00000542933 RAB4AP20338 218 aa10.51□□□□□ -0.73
LINC01089-209ENST00000542933 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
LINC01089-209ENST00000542933 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
LINC01089-209ENST00000542933 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
LINC01089-209ENST00000542933 RNF185Q96GF1 192 aa10.51□□□□□ -0.73
LINC01089-209ENST00000542933 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
LINC01089-209ENST00000542933 PRSS29PA6NIE9 313 aa10.5□□□□□ -0.73
LINC01089-209ENST00000542933 COX19Q49B96 90 aa10.5□□□□□ -0.73
LINC01089-209ENST00000542933 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
LINC01089-209ENST00000542933 YPEL4Q96NS1 127 aa10.5□□□□□ -0.73
LINC01089-209ENST00000542933 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
LINC01089-209ENST00000542933 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
LINC01089-209ENST00000542933 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
LINC01089-209ENST00000542933 PKD1P98161 4303 aa10.48□□□□□ -0.73
LINC01089-209ENST00000542933 HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
LINC01089-209ENST00000542933 MRPL51Q4U2R6 128 aaKnown RBP10.48□□□□□ -0.73
LINC01089-209ENST00000542933 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
LINC01089-209ENST00000542933 FRZBQ92765 325 aa10.48□□□□□ -0.73
LINC01089-209ENST00000542933 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
LINC01089-209ENST00000542933 TNFRSF18Q9Y5U5 241 aa10.48□□□□□ -0.73
LINC01089-209ENST00000542933 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
LINC01089-209ENST00000542933 GNB1LQ9BYB4 327 aa10.47□□□□□ -0.73
LINC01089-209ENST00000542933 SMKR1H3BMG3 65 aa10.46□□□□□ -0.73
LINC01089-209ENST00000542933 NCR2O95944 276 aa10.46□□□□□ -0.73
LINC01089-209ENST00000542933 MT-ND6P03923 174 aa10.46□□□□□ -0.73
LINC01089-209ENST00000542933 CKS2P33552 79 aa10.46□□□□□ -0.73
LINC01089-209ENST00000542933 NFE4Q86UQ8 179 aa10.46□□□□□ -0.73
LINC01089-209ENST00000542933 NIT2Q9NQR4 276 aa10.46□□□□□ -0.73
LINC01089-209ENST00000542933 BIRC6Q9NR09 4857 aa10.46□□□□□ -0.74
LINC01089-209ENST00000542933 PKHD1P08F94 4074 aa10.45□□□□□ -0.74
LINC01089-209ENST00000542933 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
LINC01089-209ENST00000542933 D6R8Y8 96 aa10.45□□□□□ -0.74
LINC01089-209ENST00000542933 APCSP02743 223 aa10.45□□□□□ -0.74
LINC01089-209ENST00000542933 RPL39LQ96EH5 51 aaKnown RBP10.45□□□□□ -0.74
LINC01089-209ENST00000542933 A0A1B0GVY2 172 aa10.44□□□□□ -0.74
LINC01089-209ENST00000542933 GAS8-AS1O95177 125 aa10.44□□□□□ -0.74
LINC01089-209ENST00000542933 IGHV3-30P01768 117 aa10.44□□□□□ -0.74
LINC01089-209ENST00000542933 IGHV3-33P01772 117 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms