RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 RITA1Q96K30 269 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 ODF3Q96PU9 254 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 TNRC6AQ8NDV7 1962 aaKnown RBP10.72□□□□□ -0.69
TRPM1-203ENST00000542188 DHRS4-AS1Q9P1J3 65 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 IGHV4-38-2P0DP08 117 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 WFDC13Q8IUB5 93 aa10.71□□□□□ -0.69
TRPM1-203ENST00000542188 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
TRPM1-203ENST00000542188 YLPM1P49750 1951 aaKnown RBP10.71□□□□□ -0.69
TRPM1-203ENST00000542188 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.69
TRPM1-203ENST00000542188 INSL3P51460 131 aa10.71□□□□□ -0.69
TRPM1-203ENST00000542188 MIFP14174 115 aa10.71□□□□□ -0.7
TRPM1-203ENST00000542188 Q6JHZ5 121 aa10.71□□□□□ -0.7
TRPM1-203ENST00000542188 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.7
TRPM1-203ENST00000542188 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.7
TRPM1-203ENST00000542188 C3orf84H3BNL1 204 aa10.7□□□□□ -0.7
TRPM1-203ENST00000542188 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
TRPM1-203ENST00000542188 UBE2D2P62837 147 aa10.7□□□□□ -0.7
TRPM1-203ENST00000542188 DEFB113Q30KQ7 82 aa10.7□□□□□ -0.7
TRPM1-203ENST00000542188 M0QXV9 152 aa10.7□□□□□ -0.7
TRPM1-203ENST00000542188 ZNF22P17026 224 aaPredicted RBP10.7□□□□□ -0.7
TRPM1-203ENST00000542188 RTTNQ86VV8 2226 aa10.69□□□□□ -0.7
TRPM1-203ENST00000542188 ZNF318Q5VUA4 2279 aa10.69□□□□□ -0.7
TRPM1-203ENST00000542188 HEATR5AQ86XA9 2040 aa10.69□□□□□ -0.7
TRPM1-203ENST00000542188 DEFB4AO15263 64 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 PRR4Q16378 134 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 HRCT1Q6UXD1 115 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 Q6Q795 121 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 FAM30AQ9NZY2 134 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 SIP14410 1827 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 CEP290O15078 2479 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 PTPRDP23468 1912 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
TRPM1-203ENST00000542188 CRYGDP07320 174 aa10.67□□□□□ -0.7
TRPM1-203ENST00000542188 KRTAP27-1Q3LI81 207 aa10.67□□□□□ -0.7
TRPM1-203ENST00000542188 C6orf99Q4VX62 202 aa10.67□□□□□ -0.7
TRPM1-203ENST00000542188 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
TRPM1-203ENST00000542188 C11orf45Q8TAV5 145 aa10.67□□□□□ -0.7
TRPM1-203ENST00000542188 C7orf33Q8WU49 177 aa10.67□□□□□ -0.7
TRPM1-203ENST00000542188 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 LRCOL1A6NCL2 159 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 RBX1P62877 108 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 FAM19A5Q7Z5A7 132 aaPredicted RBP10.66□□□□□ -0.7
TRPM1-203ENST00000542188 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 TRAV7A0A075B6U4 112 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 IGHV4-61A0A0C4DH41 118 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 FRMD6-AS1P0C7T7 363 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 TET1Q8NFU7 2136 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 TRPM7Q96QT4 1865 aa10.66□□□□□ -0.7
TRPM1-203ENST00000542188 EBI3Q14213 229 aa10.65□□□□□ -0.7
TRPM1-203ENST00000542188 SBF1O95248 1867 aa10.65□□□□□ -0.7
TRPM1-203ENST00000542188 UBE2D1P51668 147 aa10.65□□□□□ -0.71
TRPM1-203ENST00000542188 M0R378 163 aa10.64□□□□□ -0.71
TRPM1-203ENST00000542188 LST1O00453 97 aa10.64□□□□□ -0.71
TRPM1-203ENST00000542188 Q6ZSR3 168 aa10.64□□□□□ -0.71
TRPM1-203ENST00000542188 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
TRPM1-203ENST00000542188 SDK2Q58EX2 2172 aa10.64□□□□□ -0.71
TRPM1-203ENST00000542188 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
TRPM1-203ENST00000542188 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
TRPM1-203ENST00000542188 Q6ZVQ6 151 aa10.63□□□□□ -0.71
TRPM1-203ENST00000542188 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
TRPM1-203ENST00000542188 SPINK6Q6UWN8 80 aa10.62□□□□□ -0.71
TRPM1-203ENST00000542188 IGHV4-30-4P0DP06 118 aa10.62□□□□□ -0.71
TRPM1-203ENST00000542188 IGHV4-31P0DP07 118 aa10.62□□□□□ -0.71
TRPM1-203ENST00000542188 MAPKAPK5-AS1Q8N8E1 139 aa10.62□□□□□ -0.71
TRPM1-203ENST00000542188 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 Q6ZTI0 123 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 DOCK6Q96HP0 2047 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 Q6ZQY7 126 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-203ENST00000542188 DEFB1P60022 68 aa10.61□□□□□ -0.71
TRPM1-203ENST00000542188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-203ENST00000542188 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-203ENST00000542188 CASP8AP2Q9UKL3 1982 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 U3KQK5 164 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 MED12Q93074 2177 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 ZNF524Q96C55 264 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 MYLKQ15746 1914 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 IGLV2-8P01709 118 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 PYGO1Q9Y3Y4 419 aa10.6□□□□□ -0.71
TRPM1-203ENST00000542188 THADAQ6YHU6 1953 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 XGP55808 180 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 UNQ9165/PRO28630Q6UXU0 137 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 LY6LH3BQJ8 138 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 ODF3L1Q8IXM7 274 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 TRBV6-8A0A0A6YYG3 113 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 PRYO14603 147 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 XAGE1AQ9HD64 81 aa10.59□□□□□ -0.71
TRPM1-203ENST00000542188 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
TRPM1-203ENST00000542188 HILS1P60008 231 aa10.58□□□□□ -0.72
TRPM1-203ENST00000542188 LINC00526Q96FQ7 95 aa10.58□□□□□ -0.72
TRPM1-203ENST00000542188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
TRPM1-203ENST00000542188 UBE2D3P61077 147 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms