RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 DOCK4Q8N1I0 1966 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 PTPRDP23468 1912 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 TRAV17A0A0B4J275 112 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 COX7A2P2O60397 106 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 TIMM17BO60830 172 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 ASAH2BP0C7U1 165 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 HIST1H4AP62805 103 aaKnown RBP2.72□□□□□ -1.97
YBX3-210ENST00000540975 SLC48A1Q6P1K1 146 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 C5orf38Q86SI9 138 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 SERP2Q8N6R1 65 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 ZNF645Q8N7E2 425 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 Q8N8P6 123 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 WFDC5Q8TCV5 224 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 TAS2R4Q9NYW5 299 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 TIMM9Q9Y5J7 89 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 COL4A6Q14031 1691 aa2.72□□□□□ -1.97
YBX3-210ENST00000540975 OBSL1O75147 1896 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 IGHV1OR15-9A0A0B4J2B8 117 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 IGKV1D-33P01593 117 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 IGKV1-33P01594 117 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 HMGN2P05204 90 aaKnown RBP2.71□□□□□ -1.98
YBX3-210ENST00000540975 SCGB1C2P0DMR2 95 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 RNASE4P34096 147 aaKnown RBP2.71□□□□□ -1.98
YBX3-210ENST00000540975 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 SERF2P84101 59 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 LINC01554Q52M75 96 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 GUSBP11Q6P575 273 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 LYZL2Q7Z4W2 148 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 DEFB132Q7Z7B7 95 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 FAM19A2Q8N3H0 131 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 DIRC1Q969H9 104 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 COX14Q96I36 57 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 LINC01600Q96MT4 127 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 NXT2Q9NPJ8 142 aaKnown RBP2.71□□□□□ -1.98
YBX3-210ENST00000540975 LY96Q9Y6Y9 160 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 V9GYV3 84 aa2.71□□□□□ -1.98
YBX3-210ENST00000540975 C2orf16Q68DN1 1984 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 CTXND1A0A1B0GTU2 59 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 C9JCJ5 164 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 CCL16O15467 120 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 SYNJ2BPP57105 145 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 ST20-AS1Q8NBB2 130 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 RNASE6Q93091 150 aaKnown RBP2.7□□□□□ -1.98
YBX3-210ENST00000540975 TRGV9Q99603 122 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 CYSTM1Q9H1C7 97 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 ZNF492Q9P255 531 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 HIGD1BQ9P298 99 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 TAC3Q9UHF0 121 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 HILPDAQ9Y5L2 63 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 KMT2BQ9UMN6 2715 aaPredicted RBP2.7□□□□□ -1.98
YBX3-210ENST00000540975 EML5Q05BV3 1969 aa2.7□□□□□ -1.98
YBX3-210ENST00000540975 MDC1Q14676 2089 aaKnown RBP2.7□□□□□ -1.98
YBX3-210ENST00000540975 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.69□□□□□ -1.98
YBX3-210ENST00000540975 PIGBOS1A0A0B4J2F0 54 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 PPYP01298 95 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 LTAP01374 205 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 S100A4P26447 101 aaKnown RBP2.69□□□□□ -1.98
YBX3-210ENST00000540975 FUSP35637 526 aaKnown RBP eCLIP2.69□□□□□ -1.98
YBX3-210ENST00000540975 EFNA4P52798 201 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 DSCR4P56555 118 aaPredicted RBP2.69□□□□□ -1.98
YBX3-210ENST00000540975 PCBD1P61457 104 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 NPCDR1Q9BY65 106 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 LHFPL6Q9Y693 200 aa2.69□□□□□ -1.98
YBX3-210ENST00000540975 KIAA2026Q5HYC2 2103 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 IGHV1-24A0A0C4DH33 117 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 A0A1W2PQD3 144 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 SMIM27A0A1W2PRY6 76 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 IGLV2-8P01709 118 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 PRM2P04554 102 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 CCKP06307 115 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 SLC25A16P16260 332 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 FXYD2P54710 66 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 BLCAPP62952 87 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 GDF5OSQ5U4N7 250 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 SLC25A29Q8N8R3 303 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 SPTSSAQ969W0 71 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
YBX3-210ENST00000540975 ARHGAP5-AS1Q96IT6 56 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 ZNF714Q96N38 554 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 TXNDC17Q9BRA2 123 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 ARL2-SNX15V9GYD0 113 aa2.68□□□□□ -1.98
YBX3-210ENST00000540975 POLEQ07864 2286 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 A0A1B0GWA3 101 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 A6NN06 94 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 IGKV1-16P04430 117 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 ACYP1P07311 99 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 CIRBPQ14011 172 aaKnown RBP2.67□□□□□ -1.98
YBX3-210ENST00000540975 TMEM170BQ5T4T1 132 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 SCXQ7RTU7 201 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 TMEM105Q8N8V8 129 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 ITLN2Q8WWU7 325 aaPredicted RBP2.67□□□□□ -1.98
YBX3-210ENST00000540975 OSTCQ9NRP0 149 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 R4GMQ9 66 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 DYSFO75923 2080 aa2.67□□□□□ -1.98
YBX3-210ENST00000540975 IGKV1D-42A0A075B6H8 117 aa2.66□□□□□ -1.98
YBX3-210ENST00000540975 TCRBV4S1A1TA0A5B7 111 aa2.66□□□□□ -1.98
YBX3-210ENST00000540975 H3BSH0 61 aa2.66□□□□□ -1.98
YBX3-210ENST00000540975 P0C880 135 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms