RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 NTF3P20783 257 aa10.09□□□□□ -0.79
UBE3B-212ENST00000540230 SMIM7Q9BQ49 75 aa10.09□□□□□ -0.79
UBE3B-212ENST00000540230 C9JQL5 133 aa10.08□□□□□ -0.8
UBE3B-212ENST00000540230 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
UBE3B-212ENST00000540230 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
UBE3B-212ENST00000540230 NIT1Q86X76 327 aa10.08□□□□□ -0.8
UBE3B-212ENST00000540230 M0QY20 66 aa10.07□□□□□ -0.8
UBE3B-212ENST00000540230 NDUFS6O75380 124 aaKnown RBP10.07□□□□□ -0.8
UBE3B-212ENST00000540230 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
UBE3B-212ENST00000540230 FAM231DQ6ZW35 169 aa10.07□□□□□ -0.8
UBE3B-212ENST00000540230 LINC01551Q86U37 167 aa10.07□□□□□ -0.8
UBE3B-212ENST00000540230 DNAJC30Q96LL9 226 aa10.07□□□□□ -0.8
UBE3B-212ENST00000540230 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
UBE3B-212ENST00000540230 ZNF727A8MUV8 499 aa10.07□□□□□ -0.8
UBE3B-212ENST00000540230 GATCO43716 136 aaKnown RBP10.07□□□□□ -0.8
UBE3B-212ENST00000540230 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
UBE3B-212ENST00000540230 TRGC1P0CF51 173 aa10.06□□□□□ -0.8
UBE3B-212ENST00000540230 LAGE3Q14657 143 aa10.06□□□□□ -0.8
UBE3B-212ENST00000540230 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
UBE3B-212ENST00000540230 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 TWIST1Q15672 202 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 KRTAP17-1Q9BYP8 105 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
UBE3B-212ENST00000540230 PSCAO43653 123 aa10.04□□□□□ -0.8
UBE3B-212ENST00000540230 FOXA3P55318 350 aaPredicted RBP10.04□□□□□ -0.8
UBE3B-212ENST00000540230 PGLYRP4Q96LB8 373 aa10.03□□□□□ -0.8
UBE3B-212ENST00000540230 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
UBE3B-212ENST00000540230 A8MWL6 223 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 EREGO14944 169 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 WFDC2Q14508 124 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 MPV17L2Q567V2 206 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 CT83Q5H943 113 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 RASL11AQ6T310 242 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 URGCP-MRPS24S4R325 110 aa10.02□□□□□ -0.8
UBE3B-212ENST00000540230 DNAH8Q96JB1 4490 aa10.02□□□□□ -0.81
UBE3B-212ENST00000540230 A0A087WX48 190 aa10.02□□□□□ -0.81
UBE3B-212ENST00000540230 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
UBE3B-212ENST00000540230 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.81
UBE3B-212ENST00000540230 DEFB104AQ8WTQ1 72 aa10.02□□□□□ -0.81
UBE3B-212ENST00000540230 OSTCQ9NRP0 149 aa10.02□□□□□ -0.81
UBE3B-212ENST00000540230 PCLOQ9Y6V0 5065 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 H7C1H1 209 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
UBE3B-212ENST00000540230 GATD1Q8NB37 220 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 ISOC2Q96AB3 205 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 V9GYV3 84 aa10.01□□□□□ -0.81
UBE3B-212ENST00000540230 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 CDK2AP2O75956 126 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 Q8N976 141 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 TSKUQ8WUA8 353 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 UBE2WQ96B02 151 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 CHCHD5Q9BSY4 110 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 NIT2Q9NQR4 276 aa10□□□□□ -0.81
UBE3B-212ENST00000540230 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
UBE3B-212ENST00000540230 HIGD1CA8MV81 97 aa9.99□□□□□ -0.81
UBE3B-212ENST00000540230 TMEM241Q24JQ0 296 aa9.99□□□□□ -0.81
UBE3B-212ENST00000540230 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-212ENST00000540230 LECT2O14960 151 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 GAGE6Q13070 117 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 PEA15Q15121 130 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 ADIRFQ15847 76 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 FAM74A3Q4VXF1 159 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 Q8N814 137 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 C15orf54Q8N8G6 183 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 RPL39LQ96EH5 51 aaKnown RBP9.98□□□□□ -0.81
UBE3B-212ENST00000540230 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
UBE3B-212ENST00000540230 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 KRTAP10-1P60331 282 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 IQCJQ1A5X6 159 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 KCNIP4Q6PIL6 250 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 ENHOQ6UWT2 76 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 GFRA4Q9GZZ7 299 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 IGKV2D-24A0A075B6R9 120 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 FAT1Q14517 4588 aa9.97□□□□□ -0.81
UBE3B-212ENST00000540230 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 ANGP03950 147 aaKnown RBP9.96□□□□□ -0.82
UBE3B-212ENST00000540230 RBX1P62877 108 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 ELOBQ15370 118 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 NUP35Q8NFH5 326 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 BAALCQ8WXS3 180 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 SMDT1Q9H4I9 107 aa9.96□□□□□ -0.82
UBE3B-212ENST00000540230 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
UBE3B-212ENST00000540230 CLPSL2Q6UWE3 100 aa9.95□□□□□ -0.82
UBE3B-212ENST00000540230 IGLV5-52A0A0A0MRZ9 124 aa9.94□□□□□ -0.82
UBE3B-212ENST00000540230 BORCS7Q96B45 105 aa9.94□□□□□ -0.82
UBE3B-212ENST00000540230 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms