RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ANKRD39Q53RE8 183 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 TRBV6-1A0A0K0K1D8 114 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 PROP1O75360 226 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 IGHV4-31P0DP07 118 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 B9D2Q9BPU9 175 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 OTOGLQ3ZCN5 2332 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 LINC00173Q6ZV60 143 aa12.81□□□□□ -0.36
SCARB1-205ENST00000538291 Q6YL49 198 aa12.8□□□□□ -0.36
SCARB1-205ENST00000538291 ODF3BA8MYP8 253 aa12.8□□□□□ -0.36
SCARB1-205ENST00000538291 JMJD7-PLA2G4BH0Y9G9 81 aa12.8□□□□□ -0.36
SCARB1-205ENST00000538291 C20orf203Q8NBC4 194 aa12.8□□□□□ -0.36
SCARB1-205ENST00000538291 WFDC11Q8NEX6 87 aa12.8□□□□□ -0.36
SCARB1-205ENST00000538291 CSPG4Q6UVK1 2322 aa12.8□□□□□ -0.36
SCARB1-205ENST00000538291 CACNA1AO00555 2505 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 MIR7-3HGQ8N6C7 128 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 KMT2EQ8IZD2 1858 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 LECT2O14960 151 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 HILS1P60008 231 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 COA6Q5JTJ3 125 aaKnown RBP12.79□□□□□ -0.36
SCARB1-205ENST00000538291 TRAV26-1A0A087WT03 109 aa12.79□□□□□ -0.36
SCARB1-205ENST00000538291 TECTAO75443 2155 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 ANKHD1Q8IWZ3 2542 aaKnown RBP12.78□□□□□ -0.36
SCARB1-205ENST00000538291 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 SMIM9A6NGZ8 99 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 E9PLD3 99 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 IGLV2-14P01704 120 aa12.78□□□□□ -0.36
SCARB1-205ENST00000538291 IGHV1-58A0A0C4DH39 117 aa12.77□□□□□ -0.36
SCARB1-205ENST00000538291 LINC01620Q4KN68 170 aa12.77□□□□□ -0.36
SCARB1-205ENST00000538291 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.36
SCARB1-205ENST00000538291 SPANXCQ9NY87 97 aa12.77□□□□□ -0.36
SCARB1-205ENST00000538291 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.37
SCARB1-205ENST00000538291 LYRM9A8MSI8 78 aa12.77□□□□□ -0.37
SCARB1-205ENST00000538291 LGALS9O00182 355 aa12.76□□□□□ -0.37
SCARB1-205ENST00000538291 IGF1P05019 195 aa12.76□□□□□ -0.37
SCARB1-205ENST00000538291 FAM222AQ5U5X8 452 aa12.76□□□□□ -0.37
SCARB1-205ENST00000538291 PTPN13Q12923 2485 aa12.76□□□□□ -0.37
SCARB1-205ENST00000538291 CHD3Q12873 2000 aaKnown RBP12.76□□□□□ -0.37
SCARB1-205ENST00000538291 C5orf47Q569G3 176 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 Q6ZTI0 123 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 ODF3Q96PU9 254 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 COX7BP24311 80 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 HIGD1BQ9P298 99 aa12.75□□□□□ -0.37
SCARB1-205ENST00000538291 DEFB131BA0A096LNP1 70 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 IGKV3D-7A0A0C4DH55 119 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 LINC01548A6NM66 108 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 PSMB8P28062 276 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
SCARB1-205ENST00000538291 DEFB114Q30KQ6 69 aa12.73□□□□□ -0.37
SCARB1-205ENST00000538291 REG3AQ06141 175 aa12.73□□□□□ -0.37
SCARB1-205ENST00000538291 LINC00269Q8N2A0 174 aa12.73□□□□□ -0.37
SCARB1-205ENST00000538291 Q6ZUT4 128 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 C14orf132Q9NPU4 83 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 H0Y9J4 135 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 NUPR1O60356 82 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 TMEM256-PLSCR3K7ERE1 68 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 CRYGDP07320 174 aa12.72□□□□□ -0.37
SCARB1-205ENST00000538291 K7EQG2 157 aa12.71□□□□□ -0.37
SCARB1-205ENST00000538291 HIGD2AQ9BW72 106 aa12.71□□□□□ -0.37
SCARB1-205ENST00000538291 ZFAND2AQ8N6M9 145 aa12.71□□□□□ -0.37
SCARB1-205ENST00000538291 IGKV1D-37A0A075B6S9 117 aa12.71□□□□□ -0.38
SCARB1-205ENST00000538291 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.38
SCARB1-205ENST00000538291 FXYD2P54710 66 aa12.71□□□□□ -0.38
SCARB1-205ENST00000538291 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-205ENST00000538291 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
SCARB1-205ENST00000538291 PDE6GP18545 87 aa12.7□□□□□ -0.38
SCARB1-205ENST00000538291 FSTL3O95633 263 aa12.7□□□□□ -0.38
SCARB1-205ENST00000538291 TEN1Q86WV5 123 aa12.7□□□□□ -0.38
SCARB1-205ENST00000538291 ODF1Q14990 250 aa12.69□□□□□ -0.38
SCARB1-205ENST00000538291 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
SCARB1-205ENST00000538291 ATOX1O00244 68 aa12.69□□□□□ -0.38
SCARB1-205ENST00000538291 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 Q6ZSV7 163 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 ZNF843Q8N446 348 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 KIR2DL5BQ8NHK3 375 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 CLEC2BQ92478 149 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 P0DMU3 169 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
SCARB1-205ENST00000538291 PRB2P02812 416 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-205ENST00000538291 CHCHD10Q8WYQ3 142 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-205ENST00000538291 TRBV10-2A0A0K0K1G8 114 aa12.67□□□□□ -0.38
SCARB1-205ENST00000538291 MIFP14174 115 aa12.67□□□□□ -0.38
SCARB1-205ENST00000538291 H3BT86 120 aa12.67□□□□□ -0.38
SCARB1-205ENST00000538291 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-205ENST00000538291 NFE4Q86UQ8 179 aa12.66□□□□□ -0.38
SCARB1-205ENST00000538291 A0A087WZ39 114 aa12.66□□□□□ -0.38
SCARB1-205ENST00000538291 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms