RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 TWIST1Q15672 202 aa7.49□□□□□ -1.21
LMO3-213ENST00000536172 CT83Q5H943 113 aa7.49□□□□□ -1.21
LMO3-213ENST00000536172 FAM74A4Q5TZK3 123 aa7.49□□□□□ -1.21
LMO3-213ENST00000536172 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
LMO3-213ENST00000536172 IGLV5-52A0A0A0MRZ9 124 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 K7EN84 100 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
LMO3-213ENST00000536172 RPL23P62829 140 aaKnown RBP7.48□□□□□ -1.21
LMO3-213ENST00000536172 HERC1Q15751 4861 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 ZNF479Q96JC4 524 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
LMO3-213ENST00000536172 IGHV3-73A0A0B4J1V6 119 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 IGHV3-38A0A0C4DH36 116 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 TMEM218A2RU14 115 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 FAM231BA6NCW3 169 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 H7C1H1 209 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 RS1O15537 224 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 S100A8P05109 93 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 GZMBP10144 247 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 RIGQ13278 110 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 RHOHQ15669 191 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 LINC01556Q5JQF7 62 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 CFAP126Q5VTH2 177 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 LYZL1Q6UWQ5 148 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 TSKUQ8WUA8 353 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 ISOC2Q96AB3 205 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 ANAPC16Q96DE5 110 aa7.47□□□□□ -1.21
LMO3-213ENST00000536172 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 LINC00862A6NCI5 91 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 C9JQL5 133 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 SNAI2O43623 268 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 ZNF56Q15929 161 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
LMO3-213ENST00000536172 NAT8BQ9UHF3 227 aa7.46□□□□□ -1.22
LMO3-213ENST00000536172 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
LMO3-213ENST00000536172 A0A087WWL8 130 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 A0A1B0GUT8 65 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 TRBV6-4A0A1B0GX49 114 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 IBA57-AS1B1ANH7 110 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 MGPP08493 103 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 NTF3P20783 257 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 SEC11CQ9BY50 192 aa7.45□□□□□ -1.22
LMO3-213ENST00000536172 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
LMO3-213ENST00000536172 A0A1B0GW15 77 aa7.44□□□□□ -1.22
LMO3-213ENST00000536172 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
LMO3-213ENST00000536172 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
LMO3-213ENST00000536172 S100PP25815 95 aa7.44□□□□□ -1.22
LMO3-213ENST00000536172 RAB4BP61018 213 aa7.44□□□□□ -1.22
LMO3-213ENST00000536172 KCNIP4Q6PIL6 250 aa7.44□□□□□ -1.22
LMO3-213ENST00000536172 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
LMO3-213ENST00000536172 Q8N814 137 aa7.44□□□□□ -1.22
LMO3-213ENST00000536172 IGLC6P0CF74 106 aa7.43□□□□□ -1.22
LMO3-213ENST00000536172 GATA1P15976 413 aaPredicted RBP7.43□□□□□ -1.22
LMO3-213ENST00000536172 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
LMO3-213ENST00000536172 LAGE3Q14657 143 aa7.43□□□□□ -1.22
LMO3-213ENST00000536172 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
LMO3-213ENST00000536172 TM2D2Q9BX73 214 aa7.43□□□□□ -1.22
LMO3-213ENST00000536172 CTDSP1Q9GZU7 261 aa7.43□□□□□ -1.22
LMO3-213ENST00000536172 DPH3P1Q9H4G8 78 aa7.43□□□□□ -1.22
LMO3-213ENST00000536172 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
LMO3-213ENST00000536172 CTRLP40313 264 aa7.42□□□□□ -1.22
LMO3-213ENST00000536172 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
LMO3-213ENST00000536172 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
LMO3-213ENST00000536172 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
LMO3-213ENST00000536172 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 TMEM238LA0A1B0GVL6 79 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 SNAPINO95295 136 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 GHRHP01286 108 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 LELP1Q5T871 98 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 SVBPQ8N300 66 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 SLC25A29Q8N8R3 303 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 ATP6V0E2Q8NHE4 81 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 DEFB104AQ8WTQ1 72 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 JPT2Q9H910 190 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 V9GYV3 84 aa7.41□□□□□ -1.22
LMO3-213ENST00000536172 LOC100131303A0A0U1RQF7 123 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 GAGE12JA6NER3 117 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 KRTAP29-1A8MX34 341 aaPredicted RBP7.4□□□□□ -1.22
LMO3-213ENST00000536172 PPP1R17O96001 155 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 APOC3P02656 99 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 GAGE1Q13065 139 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 GAGE4Q13068 117 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 GAGE5Q13069 117 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 GAGE13Q4V321 117 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 BTF3L4Q96K17 158 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 Q9HAA7 133 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 FAT1Q14517 4588 aa7.4□□□□□ -1.22
LMO3-213ENST00000536172 MYCBP2O75592 4640 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 A0A087WWC5 75 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 TRAV8-3A0A0A6YYJ7 113 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 CAMPP49913 170 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 HBBP68871 147 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms