RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, human

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-222	ENST00000534581	AMN1	Q8IY45	258 aa		11.8	□□□□□ -0.52
C11orf49-222	ENST00000534581	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.8	□□□□□ -0.52
C11orf49-222	ENST00000534581	NEXN-AS1	Q8NBZ9	246 aa		11.8	□□□□□ -0.52
C11orf49-222	ENST00000534581	LINC00588	Q9Y4M8	146 aa		11.8	□□□□□ -0.52
C11orf49-222	ENST00000534581	URGCP-MRPS24	S4R325	110 aa		11.8	□□□□□ -0.52
C11orf49-222	ENST00000534581	TRBV7-3	A0A075B6L6	115 aa		11.79	□□□□□ -0.52
C11orf49-222	ENST00000534581	RASL11A	Q6T310	242 aa		11.79	□□□□□ -0.52
C11orf49-222	ENST00000534581	TMEM242	Q9NWH2	141 aa		11.79	□□□□□ -0.52
C11orf49-222	ENST00000534581	GTSF1L	Q9H1H1	148 aa		11.78	□□□□□ -0.52
C11orf49-222	ENST00000534581	TENM2	Q9NT68	2774 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581		A0A1B0GXF2	115 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	RAB4A	P20338	218 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	GATD1	Q8NB37	220 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	DNAJC30	Q96LL9	226 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	NIT2	Q9NQR4	276 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	MRPS16	Q9Y3D3	137 aa	Known RBP	11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	SACS	Q9NZJ4	4579 aa		11.77	□□□□□ -0.53
C11orf49-222	ENST00000534581	VPS13D	Q5THJ4	4388 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	LINC00694	P0DN24	101 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	UBE2D3	P61077	147 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	UBE2D2	P62837	147 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	FAM104B	Q5XKR9	115 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	MRAP2	Q96G30	205 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	RNF185	Q96GF1	192 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	LYST	Q99698	3801 aa		11.76	□□□□□ -0.53
C11orf49-222	ENST00000534581	TRAV9-1	A0A075B6T8	112 aa		11.75	□□□□□ -0.53
C11orf49-222	ENST00000534581	IGHV3-38	A0A0C4DH36	116 aa		11.75	□□□□□ -0.53
C11orf49-222	ENST00000534581	OR10J3	Q5JRS4	329 aa		11.75	□□□□□ -0.53
C11orf49-222	ENST00000534581	RPL39L	Q96EH5	51 aa	Known RBP	11.75	□□□□□ -0.53
C11orf49-222	ENST00000534581	NACA	E9PAV3	2078 aa		11.74	□□□□□ -0.53
C11orf49-222	ENST00000534581	TRAV8-6	A0A0B4J262	113 aa		11.74	□□□□□ -0.53
C11orf49-222	ENST00000534581	FRZB	Q92765	325 aa		11.74	□□□□□ -0.53
C11orf49-222	ENST00000534581	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.74	□□□□□ -0.53
C11orf49-222	ENST00000534581	IGLV2-18	A0A075B6J9	118 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	SMKR1	H3BMG3	65 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	NCR2	O95944	276 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	CKS2	P33552	79 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	TIRAP	P58753	221 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	MRPL51	Q4U2R6	128 aa	Known RBP	11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	LELP1	Q5T871	98 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	DAZ4	Q86SG3	579 aa	Known RBP	11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581		Q9H8V8	135 aa		11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	DAZ3	Q9NR90	486 aa	Known RBP	11.73	□□□□□ -0.53
C11orf49-222	ENST00000534581	ATRAID	Q6UW56	229 aa		11.72	□□□□□ -0.53
C11orf49-222	ENST00000534581	UPK3B	Q9BT76	320 aa		11.72	□□□□□ -0.53
C11orf49-222	ENST00000534581	ST20	Q9HBF5	79 aa		11.72	□□□□□ -0.53
C11orf49-222	ENST00000534581	GAS8-AS1	O95177	125 aa		11.71	□□□□□ -0.53
C11orf49-222	ENST00000534581	PPP1R17	O96001	155 aa		11.71	□□□□□ -0.53
C11orf49-222	ENST00000534581		M0R2N4	97 aa		11.7	□□□□□ -0.54
C11orf49-222	ENST00000534581	SIVA1	O15304	175 aa		11.7	□□□□□ -0.54
C11orf49-222	ENST00000534581	TMEM97	Q5BJF2	176 aa		11.7	□□□□□ -0.54
C11orf49-222	ENST00000534581	WFDC10B	Q8IUB3	73 aa		11.7	□□□□□ -0.54
C11orf49-222	ENST00000534581	RYR2	Q92736	4967 aa		11.7	□□□□□ -0.54
C11orf49-222	ENST00000534581		D6R8Y8	96 aa		11.69	□□□□□ -0.54
C11orf49-222	ENST00000534581	RPS10	P46783	165 aa	Known RBP	11.69	□□□□□ -0.54
C11orf49-222	ENST00000534581	DEFB104A	Q8WTQ1	72 aa		11.69	□□□□□ -0.54
C11orf49-222	ENST00000534581	HYDIN	Q4G0P3	5121 aa		11.68	□□□□□ -0.54
C11orf49-222	ENST00000534581	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.68	□□□□□ -0.54
C11orf49-222	ENST00000534581	SDHAF1	A6NFY7	115 aa		11.68	□□□□□ -0.54
C11orf49-222	ENST00000534581	PMCH	P20382	165 aa		11.68	□□□□□ -0.54
C11orf49-222	ENST00000534581	TMEM136	Q6ZRR5	245 aa		11.68	□□□□□ -0.54
C11orf49-222	ENST00000534581	TRBV6-8	A0A0A6YYG3	113 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	TRBV6-5	A0A0K0K1A5	114 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	APCS	P02743	223 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	PPBP	P02775	128 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	COTL1	Q14019	142 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	COX19	Q49B96	90 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	ORMDL3	Q8N138	153 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	SMCO4	Q9NRQ5	59 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	DNAH6	Q9C0G6	4158 aa		11.67	□□□□□ -0.54
C11orf49-222	ENST00000534581	TRBV25-1	A0A075B6N4	114 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	TMEM262	E9PQX1	116 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	HLA-DQA1	P01909	254 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	ELOB	Q15370	118 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	NRAC	Q8N912	160 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	PRELID3A	Q96N28	172 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	CHCHD5	Q9BSY4	110 aa		11.66	□□□□□ -0.54
C11orf49-222	ENST00000534581	TRAV9-2	A0A087WT02	112 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	IGHV1-24	A0A0C4DH33	117 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	NBDY	A0A0U1RRE5	68 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581		I3L3M4	83 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	TNFRSF6B	O95407	300 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	SUMO2	P61956	95 aa	Known RBP	11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	TTC32	Q5I0X7	151 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	CBLN2	Q8IUK8	224 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	GNB1L	Q9BYB4	327 aa		11.65	□□□□□ -0.54
C11orf49-222	ENST00000534581	KMT2A	Q03164	3969 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	VCY	O14598	125 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	IGHV3-30	P01768	117 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	IGHV3-33	P01772	117 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	IGHV3-30-3	P0DP02	117 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	IGHV3-30-5	P0DP03	117 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	AMT	P48728	403 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	NTM-AS1	Q6ZSK4	140 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	TMEM70	Q9BUB7	260 aa		11.64	□□□□□ -0.55
C11orf49-222	ENST00000534581	TRBV24-1	A0A075B6N3	115 aa		11.63	□□□□□ -0.55
C11orf49-222	ENST00000534581	NPY	P01303	97 aa		11.63	□□□□□ -0.55
C11orf49-222	ENST00000534581	MT-ND6	P03923	174 aa		11.63	□□□□□ -0.55
C11orf49-222	ENST00000534581	FABP9	Q0Z7S8	132 aa		11.63	□□□□□ -0.55
C11orf49-222	ENST00000534581	KIAA1644	Q3SXP7	199 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms