RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 IGKV3-7A0A075B6H7 116 aa11.29□□□□□ -0.6
RRP8-204ENST00000533907 TRAV4A0A0B4J268 109 aa11.29□□□□□ -0.6
RRP8-204ENST00000533907 A0A0J9YXY3 114 aa11.29□□□□□ -0.6
RRP8-204ENST00000533907 H3BMM0 161 aa11.29□□□□□ -0.6
RRP8-204ENST00000533907 UBE2WQ96B02 151 aa11.29□□□□□ -0.6
RRP8-204ENST00000533907 OPRPNQ99935 248 aaPredicted RBP11.29□□□□□ -0.6
RRP8-204ENST00000533907 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 IFITM1P13164 125 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 UBTD1Q9HAC8 227 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 DAZ1Q9NQZ3 744 aaKnown RBP11.28□□□□□ -0.6
RRP8-204ENST00000533907 IGF2RP11717 2491 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 TRIAP1O43715 76 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 IGHV4-39P01824 125 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 ELANEP08246 267 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
RRP8-204ENST00000533907 IGLV4-3A0A075B6K6 122 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 B5MCH6 92 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 I3L3M4 83 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 LMO4P61968 165 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 A0A0J9YXV3 536 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 CRLF1O75462 422 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
RRP8-204ENST00000533907 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
RRP8-204ENST00000533907 TEX49A0A1B0GTD5 131 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 GAGE12JA6NER3 117 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 H3BT86 120 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 GAGE7O76087 117 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 GAGE4Q13068 117 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
RRP8-204ENST00000533907 HRNRQ86YZ3 2850 aaPredicted RBP11.25□□□□□ -0.61
RRP8-204ENST00000533907 IGHV3-30-3P0DP02 117 aa11.25□□□□□ -0.61
RRP8-204ENST00000533907 LITAFQ99732 161 aa11.25□□□□□ -0.61
RRP8-204ENST00000533907 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
RRP8-204ENST00000533907 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
RRP8-204ENST00000533907 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
RRP8-204ENST00000533907 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
RRP8-204ENST00000533907 K7EMT4 169 aa11.24□□□□□ -0.61
RRP8-204ENST00000533907 IGHG2P01859 326 aa11.24□□□□□ -0.61
RRP8-204ENST00000533907 PF4V1P10720 104 aa11.24□□□□□ -0.61
RRP8-204ENST00000533907 C2orf82Q6UX34 121 aa11.24□□□□□ -0.61
RRP8-204ENST00000533907 BPESC1Q9GZL8 116 aa11.24□□□□□ -0.61
RRP8-204ENST00000533907 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
RRP8-204ENST00000533907 COX6CP09669 75 aa11.23□□□□□ -0.61
RRP8-204ENST00000533907 GNLYP22749 145 aa11.23□□□□□ -0.61
RRP8-204ENST00000533907 FAM240AA0A1B0GVK7 77 aa11.23□□□□□ -0.61
RRP8-204ENST00000533907 CD28P10747 220 aa11.23□□□□□ -0.61
RRP8-204ENST00000533907 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
RRP8-204ENST00000533907 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
RRP8-204ENST00000533907 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
RRP8-204ENST00000533907 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
RRP8-204ENST00000533907 CCDC179H3BU77 68 aa11.21□□□□□ -0.61
RRP8-204ENST00000533907 H7C423 109 aa11.21□□□□□ -0.61
RRP8-204ENST00000533907 MIAQ16674 131 aa11.21□□□□□ -0.61
RRP8-204ENST00000533907 CACNA1BQ00975 2339 aa11.21□□□□□ -0.62
RRP8-204ENST00000533907 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
RRP8-204ENST00000533907 SPXQ9BT56 116 aa11.21□□□□□ -0.62
RRP8-204ENST00000533907 EDA2RQ9HAV5 297 aa11.21□□□□□ -0.62
RRP8-204ENST00000533907 YAE1D1Q9NRH1 226 aa11.2□□□□□ -0.62
RRP8-204ENST00000533907 C19orf84I3L1E1 186 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 TRAV12-2A0A075B6T6 113 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 LST1O00453 97 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 PRSS2P07478 247 aa11.19□□□□□ -0.62
RRP8-204ENST00000533907 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
RRP8-204ENST00000533907 EDN2P20800 178 aa11.18□□□□□ -0.62
RRP8-204ENST00000533907 BRD3OSQ6XYD6 125 aa11.18□□□□□ -0.62
RRP8-204ENST00000533907 ATRXP46100 2492 aa11.18□□□□□ -0.62
RRP8-204ENST00000533907 TINCRA0A1B0GVN0 87 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 A6NDX4 124 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 SNRPD3P62318 126 aaKnown RBP11.17□□□□□ -0.62
RRP8-204ENST00000533907 LY6EQ16553 131 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 ADAMTSL4-AS1Q5T5F5 129 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 SPTBN4Q9H254 2564 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 TIMM17BO60830 172 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 TMEM61Q8N0U2 210 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 FAM104AQ969W3 186 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
RRP8-204ENST00000533907 PRRC2AP48634 2157 aaKnown RBP11.16□□□□□ -0.62
RRP8-204ENST00000533907 NBASA2RRP1 2371 aa11.16□□□□□ -0.62
RRP8-204ENST00000533907 CLEC2BQ92478 149 aa11.16□□□□□ -0.62
RRP8-204ENST00000533907 PIMREGQ9BSJ6 248 aa11.16□□□□□ -0.62
RRP8-204ENST00000533907 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
RRP8-204ENST00000533907 HIVEP3Q5T1R4 2406 aa11.15□□□□□ -0.62
RRP8-204ENST00000533907 H3BUX3 64 aa11.15□□□□□ -0.62
RRP8-204ENST00000533907 IGKV3-20P01619 116 aa11.15□□□□□ -0.62
RRP8-204ENST00000533907 CFHR3Q02985 330 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms