RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 SNX29P2Q8IUI4 249 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 FAM213BQ8TBF2 198 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 LSM10Q969L4 123 aaKnown RBP-0.34□□□□□ -2.46
ATM-220ENST00000533526 DMAC1Q96GE9 116 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 SLC35B3Q9H1N7 401 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 BANF2Q9H503 90 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 BIN3Q9NQY0 253 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 BIRC6Q9NR09 4857 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 NDUFA12Q9UI09 145 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 PDZD2O15018 2839 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 MUC17Q685J3 4493 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 FLNBO75369 2602 aaKnown RBP-0.34□□□□□ -2.46
ATM-220ENST00000533526 APC2O95996 2303 aa-0.35□□□□□ -2.46
ATM-220ENST00000533526 MRC1P22897 1456 aa-0.35□□□□□ -2.46
ATM-220ENST00000533526 MBD5Q9P267 1494 aa-0.35□□□□□ -2.46
ATM-220ENST00000533526 MYOM3Q5VTT5 1437 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 TRAV12-3A0A0B4J271 114 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 SPAARA0A1B0GVQ0 90 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 LOC107986453A0A1B0GWG9 222 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 UQCRQO14949 82 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 IGLC6P0CF74 106 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 HLA-DRB4P13762 266 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 ETV6P41212 452 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 HIST1H1AQ02539 215 aaPredicted RBP-0.35□□□□□ -2.47
ATM-220ENST00000533526 KRTAP20-2Q3LI61 65 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 S100A7L2Q5SY68 101 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 OR8J3Q8NGG0 315 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 SDF2Q99470 211 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 WFDC6Q9BQY6 131 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 HLA-DRB4X5D2U9 266 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 MYOM1P52179 1685 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 ACANP16112 2415 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 EP300Q09472 2414 aaPredicted RBP-0.35□□□□□ -2.47
ATM-220ENST00000533526 ROCK1Q13464 1354 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 PDCD11Q14690 1871 aaKnown RBP-0.35□□□□□ -2.47
ATM-220ENST00000533526 RYR2Q92736 4967 aa-0.35□□□□□ -2.47
ATM-220ENST00000533526 CCDC171Q6TFL3 1326 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SPTA1P02549 2419 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 TGP01266 2768 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 ANK3Q12955 4377 aaKnown RBP-0.36□□□□□ -2.47
ATM-220ENST00000533526 TRAV1-2A0A0B4J238 106 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 LOC100130705A0A1B0GUX0 176 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 A0A1B0GX51 115 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 IFITM5A6NNB3 132 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 H0YJX3 145 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 J3KT08 172 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 M0R2P5 195 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 PAEPP09466 180 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 CKS2P33552 79 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SPRR1AP35321 89 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SPRR2BP35325 72 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 POLR2JP52435 117 aaKnown RBP-0.36□□□□□ -2.47
ATM-220ENST00000533526 TCTAP57738 103 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 RRAS2P62070 204 aaPredicted RBP-0.36□□□□□ -2.47
ATM-220ENST00000533526 UBE2G1P62253 170 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SPAG11BQ08648 103 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SAMD13Q5VXD3 122 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 TRIQKQ629K1 86 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 IDO2Q6ZQW0 420 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SMIM11BQ8TCY0 68 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 COX7B2Q8TF08 81 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 TSLPQ969D9 159 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 TMEM141Q96I45 108 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 DSCR8Q96T75 97 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 DDA1Q9BW61 102 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 ATG5Q9H1Y0 275 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 LINC00474Q9P2X8 69 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 GINS2Q9Y248 185 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 DNAH11Q96DT5 4516 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 LRRC37A3O60309 1634 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 ARHGEF10O15013 1369 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 ABCA3Q99758 1704 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SACSQ9NZJ4 4579 aa-0.36□□□□□ -2.47
ATM-220ENST00000533526 SCN11AQ9UI33 1791 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 SETD2Q9BYW2 2564 aaPredicted RBP-0.37□□□□□ -2.47
ATM-220ENST00000533526 C10orf71Q711Q0 1435 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 NSD3Q9BZ95 1437 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 SLIT1O75093 1534 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 HMGXB3Q12766 1538 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 KIAA0556O60303 1618 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 TRBV7-1A0A0A6YYK4 115 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 TEX49A0A1B0GTD5 131 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 E5RI56 91 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 IFNA21P01568 189 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 PIRTP0C851 137 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 ACYP2P14621 99 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 S100A5P33763 92 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 EDDM3BP56851 147 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 INSL4Q14641 139 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 KLK9Q2XQG4 91 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 LELP1Q5T871 98 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 TOMM20LQ6UXN7 152 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 Q6ZUT4 128 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 C4orf33Q8N1A6 199 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 DYNLRB2Q8TF09 96 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 LCN9Q8WX39 176 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 SMIM7Q9BQ49 75 aa-0.37□□□□□ -2.47
ATM-220ENST00000533526 PRR15LQ9BU68 103 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms