RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
CHMP4A-207ENST00000533523 SSTP61278 116 aa10.75□□□□□ -0.69
CHMP4A-207ENST00000533523 CACNG7P62955 275 aa10.75□□□□□ -0.69
CHMP4A-207ENST00000533523 MRPL54Q6P161 138 aaKnown RBP10.75□□□□□ -0.69
CHMP4A-207ENST00000533523 PRO0255Q9UI72 69 aa10.75□□□□□ -0.69
CHMP4A-207ENST00000533523 PAX4O43316 350 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 DNAH10OSP0CZ25 163 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 RIGQ13278 110 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 Q5VSD8 79 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 SPANXN1Q5VSR9 72 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 CDPF1Q6NVV7 123 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 WDR73Q6P4I2 378 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 PGPEP1Q9NXJ5 209 aa10.74□□□□□ -0.69
CHMP4A-207ENST00000533523 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 TRGV4A0A0C4DH28 118 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 M0R381 172 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 ATP5L2Q7Z4Y8 100 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 ZFP82Q8N141 532 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 FRZBQ92765 325 aa10.73□□□□□ -0.69
CHMP4A-207ENST00000533523 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 NTF3P20783 257 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 FHL2Q14192 279 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 TWIST1Q15672 202 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 SYT8Q8NBV8 401 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 MSRB1Q9NZV6 116 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 TNFRSF18Q9Y5U5 241 aa10.72□□□□□ -0.69
CHMP4A-207ENST00000533523 FAT3Q8TDW7 4589 aa10.71□□□□□ -0.69
CHMP4A-207ENST00000533523 CRYBA4P53673 196 aa10.71□□□□□ -0.69
CHMP4A-207ENST00000533523 XGP55808 180 aa10.71□□□□□ -0.69
CHMP4A-207ENST00000533523 HBBP68871 147 aa10.71□□□□□ -0.69
CHMP4A-207ENST00000533523 OR4C5Q8NGB2 326 aa10.71□□□□□ -0.69
CHMP4A-207ENST00000533523 PTH2Q96A98 100 aa10.71□□□□□ -0.69
CHMP4A-207ENST00000533523 A0A1B0GW15 77 aa10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 COLCA2A8K830 154 aa10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 CAMPP49913 170 aa10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 MRPL23Q16540 153 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 ZNF876PQ49A33 203 aa10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 ZNF479Q96JC4 524 aa10.7□□□□□ -0.7
CHMP4A-207ENST00000533523 CIDEAO60543 219 aa10.69□□□□□ -0.7
CHMP4A-207ENST00000533523 S100A8P05109 93 aa10.69□□□□□ -0.7
CHMP4A-207ENST00000533523 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
CHMP4A-207ENST00000533523 A0A087WTM6 91 aa10.68□□□□□ -0.7
CHMP4A-207ENST00000533523 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
CHMP4A-207ENST00000533523 PIK3CD-AS1Q5SR53 167 aa10.68□□□□□ -0.7
CHMP4A-207ENST00000533523 RASL11AQ6T310 242 aa10.68□□□□□ -0.7
CHMP4A-207ENST00000533523 AP1S3Q96PC3 154 aa10.68□□□□□ -0.7
CHMP4A-207ENST00000533523 JPT2Q9H910 190 aa10.68□□□□□ -0.7
CHMP4A-207ENST00000533523 SRIP30626 198 aa10.67□□□□□ -0.7
CHMP4A-207ENST00000533523 RAB4BP61018 213 aa10.67□□□□□ -0.7
CHMP4A-207ENST00000533523 TMEM136Q6ZRR5 245 aa10.67□□□□□ -0.7
CHMP4A-207ENST00000533523 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.67□□□□□ -0.7
CHMP4A-207ENST00000533523 GATD1Q8NB37 220 aa10.67□□□□□ -0.7
CHMP4A-207ENST00000533523 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 RS1O15537 224 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 RAB5AP20339 215 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 EVI2AP22794 236 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 HAMPP81172 84 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 COX19Q49B96 90 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 LYPD5Q6UWN5 251 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 TMEM191AQ9H0A3 160 aa10.66□□□□□ -0.7
CHMP4A-207ENST00000533523 K7EQD1 137 aa10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 GYPEP15421 78 aa10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 GNB1LQ9BYB4 327 aa10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 SAMD10Q9BYL1 202 aa10.65□□□□□ -0.7
CHMP4A-207ENST00000533523 A0A087WWL8 130 aa10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 A8MWV9 139 aa10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 RPS10P46783 165 aaKnown RBP10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
CHMP4A-207ENST00000533523 MT-ND6P03923 174 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 CRYGDP07320 174 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 GCSHP23434 173 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
CHMP4A-207ENST00000533523 TRBV6-4A0A1B0GX49 114 aa10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 MGPP08493 103 aa10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 RHOHQ15669 191 aa10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 RNF185Q96GF1 192 aa10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 MRPL18Q9H0U6 180 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-207ENST00000533523 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
CHMP4A-207ENST00000533523 RHODO00212 210 aa10.61□□□□□ -0.71
CHMP4A-207ENST00000533523 APCSP02743 223 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 518.8 ms