RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
NXF1-216ENST00000533499 SMKR1H3BMG3 65 aa12.1□□□□□ -0.47
NXF1-216ENST00000533499 RAB4AP20338 218 aa12.1□□□□□ -0.47
NXF1-216ENST00000533499 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
NXF1-216ENST00000533499 TRBV7-3A0A075B6L6 115 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 NCR2O95944 276 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 ESRGQ1W209 222 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 FAM104BQ5XKR9 115 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 RPL39LQ96EH5 51 aaKnown RBP12.09□□□□□ -0.47
NXF1-216ENST00000533499 RNF185Q96GF1 192 aa12.09□□□□□ -0.47
NXF1-216ENST00000533499 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
NXF1-216ENST00000533499 MRPL51Q4U2R6 128 aaKnown RBP12.08□□□□□ -0.48
NXF1-216ENST00000533499 OR10J3Q5JRS4 329 aa12.08□□□□□ -0.48
NXF1-216ENST00000533499 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
NXF1-216ENST00000533499 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.08□□□□□ -0.48
NXF1-216ENST00000533499 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
NXF1-216ENST00000533499 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
NXF1-216ENST00000533499 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
NXF1-216ENST00000533499 CKS2P33552 79 aa12.07□□□□□ -0.48
NXF1-216ENST00000533499 LGALS9CQ6DKI2 356 aa12.07□□□□□ -0.48
NXF1-216ENST00000533499 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
NXF1-216ENST00000533499 DNAJC30Q96LL9 226 aa12.07□□□□□ -0.48
NXF1-216ENST00000533499 LINC00588Q9Y4M8 146 aa12.07□□□□□ -0.48
NXF1-216ENST00000533499 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
NXF1-216ENST00000533499 UBE2D3P61077 147 aa12.06□□□□□ -0.48
NXF1-216ENST00000533499 UBE2D2P62837 147 aa12.06□□□□□ -0.48
NXF1-216ENST00000533499 CBLN2Q8IUK8 224 aa12.06□□□□□ -0.48
NXF1-216ENST00000533499 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
NXF1-216ENST00000533499 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
NXF1-216ENST00000533499 SMCO4Q9NRQ5 59 aa12.05□□□□□ -0.48
NXF1-216ENST00000533499 D6R8Y8 96 aa12.04□□□□□ -0.48
NXF1-216ENST00000533499 LINC00694P0DN24 101 aa12.04□□□□□ -0.48
NXF1-216ENST00000533499 RPS10P46783 165 aaKnown RBP12.04□□□□□ -0.48
NXF1-216ENST00000533499 ELOBQ15370 118 aa12.04□□□□□ -0.48
NXF1-216ENST00000533499 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
NXF1-216ENST00000533499 LCE6AA0A183 80 aa12.03□□□□□ -0.48
NXF1-216ENST00000533499 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
NXF1-216ENST00000533499 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
NXF1-216ENST00000533499 FRZBQ92765 325 aa12.02□□□□□ -0.49
NXF1-216ENST00000533499 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.49
NXF1-216ENST00000533499 IGLV2-18A0A075B6J9 118 aa12.01□□□□□ -0.49
NXF1-216ENST00000533499 TRAV8-6A0A0B4J262 113 aa12.01□□□□□ -0.49
NXF1-216ENST00000533499 APCSP02743 223 aa12.01□□□□□ -0.49
NXF1-216ENST00000533499 KIAA1644Q3SXP7 199 aa12.01□□□□□ -0.49
NXF1-216ENST00000533499 DAZ4Q86SG3 579 aaKnown RBP12.01□□□□□ -0.49
NXF1-216ENST00000533499 DAZ3Q9NR90 486 aaKnown RBP12.01□□□□□ -0.49
NXF1-216ENST00000533499 ALMS1Q8TCU4 4167 aa12.01□□□□□ -0.49
NXF1-216ENST00000533499 SDHAF1A6NFY7 115 aa12□□□□□ -0.49
NXF1-216ENST00000533499 SCO1O75880 301 aa12□□□□□ -0.49
NXF1-216ENST00000533499 PPP1R17O96001 155 aa12□□□□□ -0.49
NXF1-216ENST00000533499 HLA-DQA1P01909 254 aa12□□□□□ -0.49
NXF1-216ENST00000533499 PMCHP20382 165 aa12□□□□□ -0.49
NXF1-216ENST00000533499 COX19Q49B96 90 aa12□□□□□ -0.49
NXF1-216ENST00000533499 ORMDL3Q8N138 153 aa12□□□□□ -0.49
NXF1-216ENST00000533499 PRELID3AQ96N28 172 aa12□□□□□ -0.49
NXF1-216ENST00000533499 TNFRSF6BO95407 300 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 PPBPP02775 128 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 FABP9Q0Z7S8 132 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 LELP1Q5T871 98 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 NRACQ8N912 160 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 GNB1LQ9BYB4 327 aa11.99□□□□□ -0.49
NXF1-216ENST00000533499 MRPL18Q9H0U6 180 aaKnown RBP11.99□□□□□ -0.49
NXF1-216ENST00000533499 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 NPYP01303 97 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 S100A1P23297 94 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 TIRAPP58753 221 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 COTL1Q14019 142 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 Q9H8V8 135 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
NXF1-216ENST00000533499 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 M0R2N4 97 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 SIVA1O15304 175 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 MT-ND6P03923 174 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 SUMO2P61956 95 aaKnown RBP11.97□□□□□ -0.49
NXF1-216ENST00000533499 TMEM97Q5BJF2 176 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 CHCHD5Q9BSY4 110 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
NXF1-216ENST00000533499 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.49
NXF1-216ENST00000533499 LOC389332A0A1B0GUA5 103 aa11.96□□□□□ -0.49
NXF1-216ENST00000533499 I3L3M4 83 aa11.96□□□□□ -0.49
NXF1-216ENST00000533499 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 IGHV1-24A0A0C4DH33 117 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 TMEM262E9PQX1 116 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 IGHV3-30P01768 117 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 IGHV3-33P01772 117 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 IGHV3-30-3P0DP02 117 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 IGHV3-30-5P0DP03 117 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 AMTP48728 403 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 YPEL4Q96NS1 127 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 UPK3BQ9BT76 320 aa11.95□□□□□ -0.5
NXF1-216ENST00000533499 VCYO14598 125 aa11.94□□□□□ -0.5
NXF1-216ENST00000533499 FCER1GP30273 86 aa11.94□□□□□ -0.5
NXF1-216ENST00000533499 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
NXF1-216ENST00000533499 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
NXF1-216ENST00000533499 POLR2KP53803 58 aaKnown RBP11.93□□□□□ -0.5
NXF1-216ENST00000533499 GAGE6Q13070 117 aa11.93□□□□□ -0.5
NXF1-216ENST00000533499 LYSTQ99698 3801 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms