RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 F5H697 171 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 SMIM17P0DL12 118 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 PGLYRP4Q96LB8 373 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
TSPAN4-220ENST00000532375 A0A087WWC5 75 aa9.39□□□□□ -0.91
TSPAN4-220ENST00000532375 TWIST1Q15672 202 aa9.39□□□□□ -0.91
TSPAN4-220ENST00000532375 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
TSPAN4-220ENST00000532375 DNAH5Q8TE73 4624 aa9.39□□□□□ -0.91
TSPAN4-220ENST00000532375 TRAV9-2A0A087WT02 112 aa9.38□□□□□ -0.91
TSPAN4-220ENST00000532375 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
TSPAN4-220ENST00000532375 IBA57-AS1B1ANH7 110 aa9.38□□□□□ -0.91
TSPAN4-220ENST00000532375 RAB14P61106 215 aa9.38□□□□□ -0.91
TSPAN4-220ENST00000532375 ADIRFQ15847 76 aa9.38□□□□□ -0.91
TSPAN4-220ENST00000532375 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
TSPAN4-220ENST00000532375 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
TSPAN4-220ENST00000532375 MGPP08493 103 aa9.37□□□□□ -0.91
TSPAN4-220ENST00000532375 C15orf54Q8N8G6 183 aa9.37□□□□□ -0.91
TSPAN4-220ENST00000532375 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
TSPAN4-220ENST00000532375 DNAJC30Q96LL9 226 aa9.37□□□□□ -0.91
TSPAN4-220ENST00000532375 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 RASL11AQ6T310 242 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 NIT1Q86X76 327 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
TSPAN4-220ENST00000532375 HERC2O95714 4834 aa9.35□□□□□ -0.91
TSPAN4-220ENST00000532375 A0A1B0GUT8 65 aa9.35□□□□□ -0.91
TSPAN4-220ENST00000532375 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
TSPAN4-220ENST00000532375 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
TSPAN4-220ENST00000532375 NIT2Q9NQR4 276 aa9.35□□□□□ -0.91
TSPAN4-220ENST00000532375 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
TSPAN4-220ENST00000532375 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
TSPAN4-220ENST00000532375 H7C1H1 209 aa9.34□□□□□ -0.91
TSPAN4-220ENST00000532375 GAS8-AS1O95177 125 aa9.34□□□□□ -0.91
TSPAN4-220ENST00000532375 RNF185Q96GF1 192 aa9.34□□□□□ -0.91
TSPAN4-220ENST00000532375 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
TSPAN4-220ENST00000532375 FRZBQ92765 325 aa9.33□□□□□ -0.92
TSPAN4-220ENST00000532375 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
TSPAN4-220ENST00000532375 RPL39LQ96EH5 51 aaKnown RBP9.32□□□□□ -0.92
TSPAN4-220ENST00000532375 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
TSPAN4-220ENST00000532375 ADCYAP1P18509 176 aa9.31□□□□□ -0.92
TSPAN4-220ENST00000532375 RAB4AP20338 218 aa9.31□□□□□ -0.92
TSPAN4-220ENST00000532375 LAGE3Q14657 143 aa9.31□□□□□ -0.92
TSPAN4-220ENST00000532375 IQCJQ1A5X6 159 aa9.31□□□□□ -0.92
TSPAN4-220ENST00000532375 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
TSPAN4-220ENST00000532375 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
TSPAN4-220ENST00000532375 RIGQ13278 110 aa9.3□□□□□ -0.92
TSPAN4-220ENST00000532375 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
TSPAN4-220ENST00000532375 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
TSPAN4-220ENST00000532375 BORCS7Q96B45 105 aa9.3□□□□□ -0.92
TSPAN4-220ENST00000532375 A0A087WTM6 91 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 TMEM218A2RU14 115 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 PNRC1Q12796 327 aaPredicted RBP9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 MPV17L2Q567V2 206 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 UQCC3Q6UW78 93 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 AMN1Q8IY45 258 aa9.29□□□□□ -0.92
TSPAN4-220ENST00000532375 A0A1B0GXF2 115 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 RPS10P46783 165 aaKnown RBP9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 Q9HAA7 133 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 RYR1P21817 5038 aa9.28□□□□□ -0.92
TSPAN4-220ENST00000532375 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 TRBV25-1A0A075B6N4 114 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 A0A087WX48 190 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 LINC00862A6NCI5 91 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 FAM104BQ5XKR9 115 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 ENHOQ6UWT2 76 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 Q8N976 141 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
TSPAN4-220ENST00000532375 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
TSPAN4-220ENST00000532375 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
TSPAN4-220ENST00000532375 TMEM262E9PQX1 116 aa9.26□□□□□ -0.93
TSPAN4-220ENST00000532375 RBX1P62877 108 aa9.26□□□□□ -0.93
TSPAN4-220ENST00000532375 GAGE6Q13070 117 aa9.26□□□□□ -0.93
TSPAN4-220ENST00000532375 NRACQ8N912 160 aa9.26□□□□□ -0.93
TSPAN4-220ENST00000532375 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 CAMPP49913 170 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 WFDC2Q14508 124 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms