RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TTC37Q6PGP7 1564 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 TRBV7-1A0A0A6YYK4 115 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 TFF1P04155 84 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 UBE2D1P51668 147 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 KRTDAPP60985 99 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 SSBP1Q04837 148 aaKnown RBP1.47□□□□□ -2.17
USP47-211ENST00000531513 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 SNHG12Q9BXW3 62 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 BLMP54132 1417 aaPredicted RBP1.47□□□□□ -2.17
USP47-211ENST00000531513 TROQ12816 1431 aaPredicted RBP1.47□□□□□ -2.17
USP47-211ENST00000531513 CASP8AP2Q9UKL3 1982 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 LAMB1P07942 1786 aa1.47□□□□□ -2.17
USP47-211ENST00000531513 MYO18AQ92614 2054 aaKnown RBP1.46□□□□□ -2.18
USP47-211ENST00000531513 LOC101927531A0A1B0GV80 90 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 RBAKDNA6NC62 111 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 NCR3O14931 201 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 MPC2O95563 127 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 ARL14EPLP0DKL9 152 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 Q6ZQY7 126 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 Q9H521 79 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 V9GYS6 101 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
USP47-211ENST00000531513 FBN3Q75N90 2809 aa1.46□□□□□ -2.18
USP47-211ENST00000531513 ARHGAP5Q13017 1502 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 NAP1L6A6NFF2 107 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 CAV3P56539 151 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 UBA52P62987 128 aaKnown RBP1.45□□□□□ -2.18
USP47-211ENST00000531513 FXYD3Q14802 87 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 ZNF56Q15929 161 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 PPIP5K1Q6PFW1 1433 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 RB1CC1Q8TDY2 1594 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 PLXNA2O75051 1894 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 TRPM7Q96QT4 1865 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 MED13Q9UHV7 2174 aa1.45□□□□□ -2.18
USP47-211ENST00000531513 ZNF142P52746 1687 aaPredicted RBP1.45□□□□□ -2.18
USP47-211ENST00000531513 RBBP6Q7Z6E9 1792 aaKnown RBP1.44□□□□□ -2.18
USP47-211ENST00000531513 FYCO1Q9BQS8 1478 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 SCAPERQ9BY12 1400 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 NBDYA0A0U1RRE5 68 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 CCL3L1P16619 93 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 SNCAP37840 140 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 KLKP1Q107X0 134 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 C20orf197Q8N268 126 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 C5orf56Q8N8D9 126 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 SCP2D1Q9UJQ7 156 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 LINC00312Q9Y6C7 94 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 EML5Q05BV3 1969 aa1.44□□□□□ -2.18
USP47-211ENST00000531513 CHD3Q12873 2000 aaKnown RBP1.44□□□□□ -2.18
USP47-211ENST00000531513 GAPVD1Q14C86 1478 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 SPHKAPQ2M3C7 1700 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 CASKIN1Q8WXD9 1431 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 TECTAO75443 2155 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 EFNA4P52798 201 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 ELOF1P60002 83 aaKnown RBP1.43□□□□□ -2.18
USP47-211ENST00000531513 GNG11P61952 73 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 C10orf128Q5T292 105 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 LINC00575Q6W349 94 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 VAMP8Q9BV40 100 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 PXDNQ92626 1479 aa1.43□□□□□ -2.18
USP47-211ENST00000531513 C10orf99Q6UWK7 81 aa1.42□□□□□ -2.18
USP47-211ENST00000531513 V9GYV3 84 aa1.42□□□□□ -2.18
USP47-211ENST00000531513 ADGRL2O95490 1459 aa1.42□□□□□ -2.18
USP47-211ENST00000531513 TET1Q8NFU7 2136 aa1.42□□□□□ -2.18
USP47-211ENST00000531513 TRBV7-3A0A075B6L6 115 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 FXYD1O00168 92 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 GNGT2O14610 69 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 LINC00208Q96KT6 92 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 CCL19Q99731 98 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 MGST2Q99735 147 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 LENEPQ9Y5L5 61 aa1.41□□□□□ -2.18
USP47-211ENST00000531513 MAGI1Q96QZ7 1491 aaPredicted RBP1.4□□□□□ -2.19
USP47-211ENST00000531513 TRBV30A0A0K0K1B3 111 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 LOC285095A0A1B0GVY8 99 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 NDUFC1O43677 76 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 MT-ATP8P03928 68 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 ASIPP42127 132 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 EDDM3BP56851 147 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
USP47-211ENST00000531513 Q0VG73 95 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 C6orf52Q5T4I8 152 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 Q86TA4 180 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 TMEM14BQ9NUH8 114 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 UQCR10Q9UDW1 63 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 DLG5Q8TDM6 1919 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 LRRC37A3O60309 1634 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 ABCC5O15440 1437 aa1.4□□□□□ -2.19
USP47-211ENST00000531513 MUC22E2RYF6 1773 aaPredicted RBP1.39□□□□□ -2.19
USP47-211ENST00000531513 DLEC1Q9Y238 1755 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 ROBO1Q9Y6N7 1651 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 RAPGEF2Q9Y4G8 1499 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 FLG2Q5D862 2391 aaPredicted RBP1.39□□□□□ -2.19
USP47-211ENST00000531513 CLPSL1A2RUU4 121 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 DYNLRB1Q9NP97 96 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 LINC00474Q9P2X8 69 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 R4GMQ9 66 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 TNS1Q9HBL0 1735 aaKnown RBP1.39□□□□□ -2.19
USP47-211ENST00000531513 NWD2Q9ULI1 1742 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms