RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
TM9SF1-211ENST00000531406 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
TM9SF1-211ENST00000531406 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
TM9SF1-211ENST00000531406 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
TM9SF1-211ENST00000531406 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
TM9SF1-211ENST00000531406 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 LRCOL1A6NCL2 159 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 PSCAO43653 123 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 SCO1O75880 301 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 GZMBP10144 247 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 ZNF876PQ49A33 203 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 LINC01556Q5JQF7 62 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
TM9SF1-211ENST00000531406 IGLV5-52A0A0A0MRZ9 124 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 IBA57-AS1B1ANH7 110 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 F2Z2F3 143 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 H3BVH4 76 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 RS1O15537 224 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 CTRLP40313 264 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 CFAP126Q5VTH2 177 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 SLC25A29Q8N8R3 303 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 NTN5Q8WTR8 489 aaPredicted RBP8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
TM9SF1-211ENST00000531406 CIDEAO60543 219 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 S100A8P05109 93 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 CACNG7P62955 275 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 HAMPP81172 84 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 ATP5L2Q7Z4Y8 100 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 NUP35Q8NFH5 326 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 PGLYRP4Q96LB8 373 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 PRADC1Q9BSG0 188 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 Q9HAA7 133 aa8.57□□□□□ -1.04
TM9SF1-211ENST00000531406 IGHV3-73A0A0B4J1V6 119 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 A0A1B0GUT8 65 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 TRBV6-4A0A1B0GX49 114 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 SNAI2O43623 268 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 ARMS2P0C7Q2 107 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 RIGQ13278 110 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 ELOBQ15370 118 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 RHOHQ15669 191 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 OR10J3Q5JRS4 329 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 SPANXN1Q5VSR9 72 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 TMEM70Q9BUB7 260 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 PHLDA3Q9Y5J5 127 aa8.56□□□□□ -1.04
TM9SF1-211ENST00000531406 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 TRBV24-1A0A075B6N3 115 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 A0A1B0GW15 77 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 HBBP68871 147 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 COX19Q49B96 90 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 LELP1Q5T871 98 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 ZFP82Q8N141 532 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 Q8N814 137 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 PTH2Q96A98 100 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 SSBP4Q9BWG4 385 aaPredicted RBP8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
TM9SF1-211ENST00000531406 TGIF2-C20orf24A0A0A6YYL0 155 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 WDR73Q6P4I2 378 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 RASL11AQ6T310 242 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
TM9SF1-211ENST00000531406 TWIST1Q15672 202 aa8.53□□□□□ -1.04
TM9SF1-211ENST00000531406 Q6ZSN1 163 aa8.53□□□□□ -1.04
TM9SF1-211ENST00000531406 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
TM9SF1-211ENST00000531406 OR10AG1Q8NH19 301 aa8.53□□□□□ -1.04
TM9SF1-211ENST00000531406 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
TM9SF1-211ENST00000531406 M0R381 172 aa8.52□□□□□ -1.05
TM9SF1-211ENST00000531406 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
TM9SF1-211ENST00000531406 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.52□□□□□ -1.05
TM9SF1-211ENST00000531406 AP1S3Q96PC3 154 aa8.52□□□□□ -1.05
TM9SF1-211ENST00000531406 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
TM9SF1-211ENST00000531406 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
TM9SF1-211ENST00000531406 MUC21A0A0G2JKD1 596 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 MUC21A0A140T8X8 626 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 A0A1B0GXF2 115 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 MT-ND6P03923 174 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 CAMPP49913 170 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 RAB4BP61018 213 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 WFDC2Q14508 124 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 LAGE3Q14657 143 aa8.51□□□□□ -1.05
TM9SF1-211ENST00000531406 PIK3CD-AS1Q5SR53 167 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms