RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 F2Z2F3 143 aa12.54□□□□□ -0.4
PTPRU-211ENST00000531385 NTF3P20783 257 aa12.54□□□□□ -0.4
PTPRU-211ENST00000531385 NIT1Q86X76 327 aa12.54□□□□□ -0.4
PTPRU-211ENST00000531385 GTSF1Q8WW33 167 aa12.54□□□□□ -0.4
PTPRU-211ENST00000531385 DNAJC30Q96LL9 226 aa12.54□□□□□ -0.4
PTPRU-211ENST00000531385 PSCAO43653 123 aa12.53□□□□□ -0.4
PTPRU-211ENST00000531385 GATCO43716 136 aaKnown RBP12.53□□□□□ -0.4
PTPRU-211ENST00000531385 C9JQL5 133 aa12.52□□□□□ -0.41
PTPRU-211ENST00000531385 EREGO14944 169 aa12.52□□□□□ -0.41
PTPRU-211ENST00000531385 TEX261Q6UWH6 196 aa12.52□□□□□ -0.41
PTPRU-211ENST00000531385 TRBV6-8A0A0A6YYG3 113 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 ZNF727A8MUV8 499 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 M0QY20 66 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 LAGE3Q14657 143 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 TWIST1Q15672 202 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 URGCP-MRPS24S4R325 110 aa12.51□□□□□ -0.41
PTPRU-211ENST00000531385 LRCOL1A6NCL2 159 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 SRSF3P84103 164 aaKnown RBP12.5□□□□□ -0.41
PTPRU-211ENST00000531385 NTM-AS1Q6ZSK4 140 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 FAM231DQ6ZW35 169 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
PTPRU-211ENST00000531385 FOXA3P55318 350 aaPredicted RBP12.49□□□□□ -0.41
PTPRU-211ENST00000531385 WFDC2Q14508 124 aa12.49□□□□□ -0.41
PTPRU-211ENST00000531385 CNFNQ9BYD5 112 aa12.49□□□□□ -0.41
PTPRU-211ENST00000531385 KRTAP17-1Q9BYP8 105 aa12.49□□□□□ -0.41
PTPRU-211ENST00000531385 A0A087WX48 190 aa12.48□□□□□ -0.41
PTPRU-211ENST00000531385 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
PTPRU-211ENST00000531385 TRAV26-2A0A0B4J265 109 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 LECT2O14960 151 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 NDUFS6O75380 124 aaKnown RBP12.47□□□□□ -0.41
PTPRU-211ENST00000531385 MPV17L2Q567V2 206 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 WDR73Q6P4I2 378 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 UBE2WQ96B02 151 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
PTPRU-211ENST00000531385 A8MWL6 223 aa12.46□□□□□ -0.41
PTPRU-211ENST00000531385 H7C1H1 209 aa12.46□□□□□ -0.41
PTPRU-211ENST00000531385 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.41
PTPRU-211ENST00000531385 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
PTPRU-211ENST00000531385 GAGE6Q13070 117 aa12.45□□□□□ -0.42
PTPRU-211ENST00000531385 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
PTPRU-211ENST00000531385 Q8N976 141 aa12.45□□□□□ -0.42
PTPRU-211ENST00000531385 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-211ENST00000531385 CDK2AP2O75956 126 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 CT83Q5H943 113 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 GATD1Q8NB37 220 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
PTPRU-211ENST00000531385 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
PTPRU-211ENST00000531385 RPL23P62829 140 aaKnown RBP12.43□□□□□ -0.42
PTPRU-211ENST00000531385 ADIRFQ15847 76 aa12.43□□□□□ -0.42
PTPRU-211ENST00000531385 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
PTPRU-211ENST00000531385 Q8N814 137 aa12.43□□□□□ -0.42
PTPRU-211ENST00000531385 ISOC2Q96AB3 205 aa12.43□□□□□ -0.42
PTPRU-211ENST00000531385 RPL39LQ96EH5 51 aaKnown RBP12.43□□□□□ -0.42
PTPRU-211ENST00000531385 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
PTPRU-211ENST00000531385 TRBV25-1A0A075B6N4 114 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 HIGD1CA8MV81 97 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 ATRAIDQ6UW56 229 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 TSKUQ8WUA8 353 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 NIT2Q9NQR4 276 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 V9GYV3 84 aa12.42□□□□□ -0.42
PTPRU-211ENST00000531385 PCLOQ9Y6V0 5065 aa12.41□□□□□ -0.42
PTPRU-211ENST00000531385 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
PTPRU-211ENST00000531385 PEA15Q15121 130 aa12.41□□□□□ -0.42
PTPRU-211ENST00000531385 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
PTPRU-211ENST00000531385 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
PTPRU-211ENST00000531385 ABCA13Q86UQ4 5058 aa12.41□□□□□ -0.42
PTPRU-211ENST00000531385 IGLV5-52A0A0A0MRZ9 124 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 IGHV1-24A0A0C4DH33 117 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 RBX1P62877 108 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 ELOBQ15370 118 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 IQCJQ1A5X6 159 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 FAM74A3Q4VXF1 159 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 ENHOQ6UWT2 76 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 SMIM15Q7Z3B0 74 aa12.4□□□□□ -0.42
PTPRU-211ENST00000531385 DNAH8Q96JB1 4490 aa12.39□□□□□ -0.43
PTPRU-211ENST00000531385 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
PTPRU-211ENST00000531385 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
PTPRU-211ENST00000531385 RMI2Q96E14 147 aa12.39□□□□□ -0.43
PTPRU-211ENST00000531385 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
PTPRU-211ENST00000531385 A0A1B0GUT8 65 aa12.38□□□□□ -0.43
PTPRU-211ENST00000531385 CRPP02741 224 aa12.38□□□□□ -0.43
PTPRU-211ENST00000531385 FAT1Q14517 4588 aa12.38□□□□□ -0.43
PTPRU-211ENST00000531385 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.37□□□□□ -0.43
PTPRU-211ENST00000531385 GCSHP23434 173 aa12.37□□□□□ -0.43
PTPRU-211ENST00000531385 HAMPP81172 84 aa12.37□□□□□ -0.43
PTPRU-211ENST00000531385 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
PTPRU-211ENST00000531385 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms